Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi5g569 | ATGATGAGTCAAGTGGGTCCAAAGGAAGATAATGAAGACTCCAATTTTCCTTTTTTTTTCTTGCCTAGATGGCATCCTGTCTTGCCTTTGTGCCTCTTTGACCACAAAATTCATCTCTTGTTTCAATTTTTCTTTCAGTCTTGCTACCCTTTTTTGTCTTTTGAAAACATCATGTCCAATATTTTGCATGTCAACTTAAGTAGCATAGGGTCATTACTCGATGTGCCAAGCACCCTCAGCAAACCCAGCAAGAGATGGCACTTGGCTTTTGCTACTATATATTGTTCCAGGGCCCTACACTCTCTTCTCAACGATCCTCTCTCCAACAACAAAAACAAGAGCAGGAAACTCCTGCTTAACACTCCTCCTTTTGTGGCCCTCGATGTTAAGCCCTGTTCTGGCTTCTCAGACATTGATCAAACAAGCCTCACTGATTTAGTGAAGGCGAAAAACTTAGACCAGCTTCTTGAACTCGGAGGAGTTGAAGGTGTGGCTGAAGCTCTAAAAGCAGATTTCAAAAATGGCATCCACGGTGACGTTCAAGATGTTGCTCGCAGGAAGCAGGAGTTCGGTTCAAACACATACCAGAAGCCACCTCCGAAAAGCATCCTCCACTTTGTGGAAGGGTGGTACGATGGTGGAAGCATCTTTCTTGCTGTCTTTCTAGTCATTTCTGTCTCTGCTGTAAGTAATTTCAAACAAAACAGACAATTTGATAAGTTGTCAAAGGTCAGCAACAATATACAGGTTGATGTTGTCCGGCAAGGGCGACGTCAGCAGATTTCTATATTTGAGATTGTTGTTGGAGATGTTGTTTGCTTGAAGATTGGAGATCAAGTTCCTGCTGATGGATTGTTCTTGGATGGGCATTCATTACAAGTGAATGAATCAAGCATGACAGGGGAGAGTGATCATGTGGAAGTCAACACCAGCCTGAATCCATTTTTGTTTTCTGGAACCAAAATAGCTGATGGATATGGTCGAATGCTTGTGACGTCTGTTGGGATGAACACAACATGGGGTGAGATGATGAGCACAATCAGCCGCGAAACTAATGAACAGACACCCTTACAAGCTCGGCTTAACAAGCTAACTTCATCAATTGGTAAAGTTGGTTTGGCATTCAATGGCAGCAAAACTAAGGCTGATGATATAGTGAATGCTGTGGTCGGAATCATTGCTGCTGCAGTTACCATTGTGGTCGTTGCCATTCCAGAAGGTTTGCCGTTGGCTGTCACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAGGCTATGGTTCGGAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCCACCACCATTTGTACTGACAAAACAGGTACCCTCACTCTGAACCAGATGAAGCCTTCCTCATTTAAATTCGAGTTTTCTGGTAGTCCCACTGAAAAAGCAATACTTTCTTGGGCTGTCCTGGAACTTGATATGGACATGGAGAGAATGAAGAAGAATTATAACATTCTTCATGTTGAAGCTTTCAATTCGGAGAAGAAGAGGAGCGGGATTTTAATAAGGAAGAAGGCTGACAACACAATCCACGTGCACTGGAAGGGAGCGGCAGAGATGATATTAGCAATGTGTTCCAGTTACTATGACGTCTCTGGAAGCATGAAAGATATGGATGATGGTGAAAGGATGATATTTGAGCAAATAATTCAAGAAGACAGCTTGACCCTTATAGCACTGGTGGGGATAAAGGACCCATGTAGGCCAGGGGTGAGAAAAGCCGTGGAAGATTGCCAATATGCTGGAGTGAATGTTAAAATGATCACTGGCGACAATATTTTCACTGCGAGAGCCATAGCCACTGAATTCGATAAAATCCATGTGATGGCTAGATCCTCTCCCTTTGATAAACTTCTTATGGTACAGTGCTTGAAACAGAAAGGCCATGTGGTCGCAGTCACAGGCGACGGCACAAATGATGCACCGGCATTAAAAGAAGCTGACATAGGACTTTCTATGGGGATACAGGGCACTGAAGTTGCAAAGGAGAGCTCAGATATCATCATTTTAGATGACAATTTTGCTTCTGTAGCCACGGTTTTGAGGTGGGGAAGGTGTGTTTATAACAACATCCAGAAATTCATCCAGTTCCAGCTCACAGTGAATGTTGCAGCCCTTGTAATCAACTTTGTGGCAGCAGCTTCAGCTGGTGAGGTACCACTGACAGCCGTCCAGTTACTATGGGTGAACTTGATCATGGACACATTAGGTGCTCTGGCTCTCGCAACAGAGCGGCCCACCAAGGAACTCATGGAGAAGCCACCTGTGGGTCGAGCTGAGCCCCTCATCACCAACATCATGTGGAGGAATCTATTAGCCCAAGCTCTGTATCAGATAGTCGTACTCTTGACCCTACAATTCAATGGAGAATCAATCTTTGGCAACAAGTTGTTTTTGGGGATCATTGGGATAACCATTATCCTTCAGGTGGTTATGGTGGAGTTTTTGAAGAAATTTGCGGATACAGAGAGGTTGGATTGGGGACAATGGGGTGCATGCATTGGAGTTGCAGCTGCATCTTGGCCAATCGGCTGGCTTGTCAAGTGCATACCTGTTTCAGATAAACCAAAATACTTCGTCTTCATTCACATAAATGTAATGTGTGGTTGGAAATCTGAACAACTTTATCCCTTCTTGTTGGTAGGAAGTTATGGCAGGATGGTAGGGAAGAGATATGATAGTGACGCATCAGCATGGAGAGCAAAGCAGTCGGGTCGACCTTGGATTTTTAATAATTCAAAGCCTCAGGAAATTTATCATATTGTTTTGCCATTGCCAACCATGGAGAGAAAGACTTTAAATTGCAATGAACTCTTTAGGAAGTTCATTGCCAATTTTGATTCCATACAAATCAAGGGTATCGACCAGAACCTAATCAACAACTCATCTACAAGTAACGCTCCTCCACACTCAGCAGGCTGCTATCCTTTTCTTCTTCATTTTCTTGCCTGCGGTGTTGCTTGGACAATAAAACTCATCTCTTGTTTCGGACCTAATGGTATCCTTTTTTGCCATTTGGAAAAAGAATGTCCGGTATTTTGCATGTTGAGTTGCATGGCGTCCTTAGAAAACGTGCCAACTATCCTTAGAAAACCCATCAAGAGATGGCGCTTGGCCTTTGCTACTATCTATTTTTCCAGGACGCTACGCTCTCTTCTCCATCACCCTCTGTCCAATAACAACAGCAGCTGCAGCAAACTCCCCTCCAGTACTCCTCCTTTTTTGGTCCTCGACGTTAAGGCGGACGCTGACTTCTCAAACGTTGATCAAACAAGCCTCACTGCATTAGTGAAGGAGAAAAACTTAGACCAGCTTCTTGGATTTGGAGGAGTTGAAGGTGTGGCTGTTGCTCTACGATCAGATGTCAAAAATGGCATCCATGGTGCTGCAAAGGACGTTGCTTGGAGGCAGGAGGCGTTCGGTTCAAACACATACCCGAGGCCACCTACGAAGAGCTTCTTCCACTTTGTGGTGGAAGCTTTTAAGGATCTTACAATTCTCGTACTTCTAGTCTGTGCCACACTCTCTCTTTGTTTTGGAATTAAAGAGCATGGGCTGAAGGAAGGGTGGTACGACGGTGGAAGCATACTTGTCGCCTTGTCAAAAGTCAGCAACAATATTCAGAGTGACAACGTGGAAGTCAACACCAGCCAGAATCCATTTTTGTTTTCTGGAACCAAGGTAGCTGATGGATATGCTCTAATGCTTGTGACATCTGTTGGCATGAACACAACATGGGGCCAGATGATGAGCACAATCAGCCGCGACACCAATGAACAGACACCCTTACAAGCTCGGCTTAACGAGCTAACTTCATCAATTGGTAAGGTTGGTTTGACAGTTGCATTTCTAGTTCTTGTAACAAAGTCTGATGATGTAGTGAATGCGGTAGTCGGAATCATTGCCTCTGCAGTTAGCATTTTGGTTATGTCAATTCCGGAAGGCTTGCCATTGGCTGTAACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAGGCCATGGTTCGGAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCTACCACCATTTGTACCGACAAAACAGGTACCCTCACTCTGAACCAGATGAAGGTGACAAACATTTACAGGGACACTACAGCTAAACTCGAGTTTTCTGCCTTCAATTCAGAGAAGAAAAGAAGCGGGATTCTAATGAGAAAGAAGACTGACAACACAATCCACGTGCATTGGAAGGGAGCAGCAGAGATGATATTAGCAATGTGTTCAAGTTACTATGATGCTTCTGGAAGGATGAAAGATCTGAATGTTACTGAAAGGATGACATTTGAGCAAATAATTCAAGGCCGGCAAAAGATAAAAGAAGACAGCTTGACCCTTATAGGATTGATGGGGATAAAGGACCCATGTAGACCAGGGGTGAGAAAAGCCGTGGAAGATTGCCAACACGCTGGAGTGAACGTCAAAATGATCACTGGTGACAATGTCTTCACTGCGAGAGCTATAGCTACTGAATTCGATAAAATCTGCGTGATGGCCAGGTCCTCTCCCTTTGATAAACTTCTCATGATACGGTGCTTGAAACAGAAGGGTCATGTGGTTGCAGTGACAGGTGATGGCACAAATGATGCACCAGCATTAAAAGAAGCGGACATAGGACTTTCTATGGGGATACAGGGCACTGAAGTTGCAAAGGAGAGCTCAGATATCATCATCTTGGATGATAATTTTGCTTCGGTGGCAATGGTTTTGAGTCCCATTGACAGCAGTGCAACTGTTGTGGCCCAAGCTTTGTATCAGATAGCTGTCCTCTTGACCCTACAGTTCAAAGGAGGATCAATCTTTGGTGTGAAAGACAAGATAAAGAACACCCTGATATTCAATACTTTTGTGCTATGCCAAGTCTTCAACGAATTCAATGCAAGGAAGCTGGAGAAGAAGAATATCTTTAAGGGGATACACAAAAACAAGTTATTTTTGGGGGTCATTGGGATAACCGTTATCCTTCAGGTTGTCATGGTTGAATTTTTGAACAAATTTGCAGATACGGAGAGGTTGGATCGGGGACAATGGGAGGCCTGCATTGCCATTGCAGCCATGTCTTGGCCAATTGGCTTTGTTGTCAAGTGCATACCTGTTTCAGAAAAACCATTTCTTAGATATCTAAAGTGGTAG | 5199 | 44.14 | MMSQVGPKEDNEDSNFPFFFLPRWHPVLPLCLFDHKIHLLFQFFFQSCYPFLSFENIMSNILHVNLSSIGSLLDVPSTLSKPSKRWHLAFATIYCSRALHSLLNDPLSNNKNKSRKLLLNTPPFVALDVKPCSGFSDIDQTSLTDLVKAKNLDQLLELGGVEGVAEALKADFKNGIHGDVQDVARRKQEFGSNTYQKPPPKSILHFVEGWYDGGSIFLAVFLVISVSAVSNFKQNRQFDKLSKVSNNIQVDVVRQGRRQQISIFEIVVGDVVCLKIGDQVPADGLFLDGHSLQVNESSMTGESDHVEVNTSLNPFLFSGTKIADGYGRMLVTSVGMNTTWGEMMSTISRETNEQTPLQARLNKLTSSIGKVGLAFNGSKTKADDIVNAVVGIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKPSSFKFEFSGSPTEKAILSWAVLELDMDMERMKKNYNILHVEAFNSEKKRSGILIRKKADNTIHVHWKGAAEMILAMCSSYYDVSGSMKDMDDGERMIFEQIIQEDSLTLIALVGIKDPCRPGVRKAVEDCQYAGVNVKMITGDNIFTARAIATEFDKIHVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAASAGEVPLTAVQLLWVNLIMDTLGALALATERPTKELMEKPPVGRAEPLITNIMWRNLLAQALYQIVVLLTLQFNGESIFGNKLFLGIIGITIILQVVMVEFLKKFADTERLDWGQWGACIGVAAASWPIGWLVKCIPVSDKPKYFVFIHINVMCGWKSEQLYPFLLVGSYGRMVGKRYDSDASAWRAKQSGRPWIFNNSKPQEIYHIVLPLPTMERKTLNCNELFRKFIANFDSIQIKGIDQNLINNSSTSNAPPHSAGCYPFLLHFLACGVAWTIKLISCFGPNGILFCHLEKECPVFCMLSCMASLENVPTILRKPIKRWRLAFATIYFSRTLRSLLHHPLSNNNSSCSKLPSSTPPFLVLDVKADADFSNVDQTSLTALVKEKNLDQLLGFGGVEGVAVALRSDVKNGIHGAAKDVAWRQEAFGSNTYPRPPTKSFFHFVVEAFKDLTILVLLVCATLSLCFGIKEHGLKEGWYDGGSILVALSKVSNNIQSDNVEVNTSQNPFLFSGTKVADGYALMLVTSVGMNTTWGQMMSTISRDTNEQTPLQARLNELTSSIGKVGLTVAFLVLVTKSDDVVNAVVGIIASAVSILVMSIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTNIYRDTTAKLEFSAFNSEKKRSGILMRKKTDNTIHVHWKGAAEMILAMCSSYYDASGRMKDLNVTERMTFEQIIQGRQKIKEDSLTLIGLMGIKDPCRPGVRKAVEDCQHAGVNVKMITGDNVFTARAIATEFDKICVMARSSPFDKLLMIRCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVAMVLSPIDSSATVVAQALYQIAVLLTLQFKGGSIFGVKDKIKNTLIFNTFVLCQVFNEFNARKLEKKNIFKGIHKNKLFLGVIGITVILQVVMVEFLNKFADTERLDRGQWEACIAIAAMSWPIGFVVKCIPVSEKPFLRYLKW* | 1733 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5884387 | 5899015 | - | Vvi5g569 | Vvi5g569 | 786711 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi5g569 | 1732 | SUPERFAMILY | Calcium ATPase, transduction domain A | 247 | 346 | IPR008250 | - | |
Vvi5g569 | 1732 | Gene3D | - | 235 | 348 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 1601 | 1708 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 208 | 463 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 615 | 806 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 461 | 563 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 1457 | 1513 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 563 | 614 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 807 | 851 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 1514 | 1592 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 1220 | 1382 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 1391 | 1457 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 1029 | 1212 | - | - | |
Vvi5g569 | 1732 | PANTHER | CATION TRANSPORTING ATPASE | 66 | 207 | - | - | |
Vvi5g569 | 1732 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 1368 | 1374 | IPR018303 | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 461 | 563 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 563 | 614 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1029 | 1212 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 807 | 851 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1514 | 1592 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1220 | 1382 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1391 | 1457 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 66 | 207 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 615 | 806 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1601 | 1708 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 208 | 463 | - | - | |
Vvi5g569 | 1732 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1457 | 1513 | - | - | |
Vvi5g569 | 1732 | Gene3D | - | 465 | 561 | IPR023299 | GO:0000166 | |
Vvi5g569 | 1732 | Gene3D | - | 1595 | 1721 | - | - | |
Vvi5g569 | 1732 | PRINTS | H+-transporting ATPase (proton pump) signature | 646 | 662 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi5g569 | 1732 | PRINTS | H+-transporting ATPase (proton pump) signature | 678 | 703 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi5g569 | 1732 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 216 | 726 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi5g569 | 1732 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 1265 | 1593 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi5g569 | 1732 | SUPERFAMILY | HAD-like | 444 | 751 | IPR036412 | - | |
Vvi5g569 | 1732 | Gene3D | - | 579 | 614 | IPR023214 | - | |
Vvi5g569 | 1732 | Gene3D | - | 1515 | 1588 | IPR023214 | - | |
Vvi5g569 | 1732 | Gene3D | - | 617 | 691 | IPR023214 | - | |
Vvi5g569 | 1732 | Gene3D | - | 443 | 455 | IPR023214 | - | |
Vvi5g569 | 1732 | Gene3D | - | 1478 | 1513 | IPR023214 | - | |
Vvi5g569 | 1732 | Pfam | Cation transporter/ATPase, N-terminus | 159 | 206 | IPR004014 | - | |
Vvi5g569 | 1732 | Pfam | Cation transporter/ATPase, N-terminus | 1122 | 1188 | IPR004014 | - | |
Vvi5g569 | 1732 | Pfam | haloacid dehalogenase-like hydrolase | 1363 | 1559 | - | - | |
Vvi5g569 | 1732 | Pfam | haloacid dehalogenase-like hydrolase | 443 | 660 | - | - | |
Vvi5g569 | 1732 | SUPERFAMILY | HAD-like | 1364 | 1593 | IPR036412 | - | |
Vvi5g569 | 1732 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 1121 | 1721 | IPR023298 | - | |
Vvi5g569 | 1732 | SUPERFAMILY | Calcium ATPase, transduction domain A | 1222 | 1264 | IPR008250 | - | |
Vvi5g569 | 1732 | Gene3D | - | 1168 | 1386 | - | - | |
Vvi5g569 | 1732 | SFLD | Haloacid Dehalogenase | 1364 | 1589 | - | - | |
Vvi5g569 | 1732 | SFLD | Haloacid Dehalogenase | 428 | 699 | - | - | |
Vvi5g569 | 1732 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 158 | 865 | IPR023298 | - | |
Vvi5g569 | 1732 | Pfam | E1-E2 ATPase | 249 | 424 | - | - | |
Vvi5g569 | 1732 | Pfam | E1-E2 ATPase | 1226 | 1344 | - | - | |
Vvi5g569 | 1732 | Gene3D | - | 800 | 867 | - | - | |
Vvi5g569 | 1732 | Gene3D | - | 564 | 578 | IPR023299 | GO:0000166 | |
Vvi5g569 | 1732 | Gene3D | - | 1420 | 1477 | IPR023299 | GO:0000166 | |
Vvi5g569 | 1732 | SMART | Cation_ATPase_N_a_2 | 1119 | 1193 | IPR004014 | - | |
Vvi5g569 | 1732 | Pfam | Cation transporting ATPase, C-terminus | 802 | 861 | IPR006068 | - | |
Vvi5g569 | 1732 | Pfam | Cation transporting ATPase, C-terminus | 1601 | 1718 | IPR006068 | - | |
Vvi5g569 | 1732 | Pfam | Cation transporting ATPase, C-terminus | 731 | 801 | IPR006068 | - | |
Vvi5g569 | 1732 | Gene3D | - | 208 | 442 | - | - | |
Vvi5g569 | 1732 | Gene3D | - | 692 | 794 | - | - | |
Vvi5g569 | 1732 | PRINTS | P-type cation-transporting ATPase superfamily signature | 295 | 309 | - | - | |
Vvi5g569 | 1732 | PRINTS | P-type cation-transporting ATPase superfamily signature | 446 | 460 | - | - | |
Vvi5g569 | 1732 | PRINTS | P-type cation-transporting ATPase superfamily signature | 571 | 582 | - | - | |
Vvi5g569 | 1732 | PRINTS | P-type cation-transporting ATPase superfamily signature | 593 | 603 | - | - | |
Vvi5g569 | 1732 | PRINTS | P-type cation-transporting ATPase superfamily signature | 646 | 665 | - | - | |
Vvi5g569 | 1732 | PRINTS | P-type cation-transporting ATPase superfamily signature | 670 | 682 | - | - | |
Vvi5g569 | 1732 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 448 | 454 | IPR018303 | - | |
Vvi5g569 | 1732 | SFLD | p-type atpase | 428 | 699 | IPR044492 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi5g569 | K01537 | - | vvi:100254645 | 1449.11 |