Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g569 ATGATGAGTCAAGTGGGTCCAAAGGAAGATAATGAAGACTCCAATTTTCCTTTTTTTTTCTTGCCTAGATGGCATCCTGTCTTGCCTTTGTGCCTCTTTGACCACAAAATTCATCTCTTGTTTCAATTTTTCTTTCAGTCTTGCTACCCTTTTTTGTCTTTTGAAAACATCATGTCCAATATTTTGCATGTCAACTTAAGTAGCATAGGGTCATTACTCGATGTGCCAAGCACCCTCAGCAAACCCAGCAAGAGATGGCACTTGGCTTTTGCTACTATATATTGTTCCAGGGCCCTACACTCTCTTCTCAACGATCCTCTCTCCAACAACAAAAACAAGAGCAGGAAACTCCTGCTTAACACTCCTCCTTTTGTGGCCCTCGATGTTAAGCCCTGTTCTGGCTTCTCAGACATTGATCAAACAAGCCTCACTGATTTAGTGAAGGCGAAAAACTTAGACCAGCTTCTTGAACTCGGAGGAGTTGAAGGTGTGGCTGAAGCTCTAAAAGCAGATTTCAAAAATGGCATCCACGGTGACGTTCAAGATGTTGCTCGCAGGAAGCAGGAGTTCGGTTCAAACACATACCAGAAGCCACCTCCGAAAAGCATCCTCCACTTTGTGGAAGGGTGGTACGATGGTGGAAGCATCTTTCTTGCTGTCTTTCTAGTCATTTCTGTCTCTGCTGTAAGTAATTTCAAACAAAACAGACAATTTGATAAGTTGTCAAAGGTCAGCAACAATATACAGGTTGATGTTGTCCGGCAAGGGCGACGTCAGCAGATTTCTATATTTGAGATTGTTGTTGGAGATGTTGTTTGCTTGAAGATTGGAGATCAAGTTCCTGCTGATGGATTGTTCTTGGATGGGCATTCATTACAAGTGAATGAATCAAGCATGACAGGGGAGAGTGATCATGTGGAAGTCAACACCAGCCTGAATCCATTTTTGTTTTCTGGAACCAAAATAGCTGATGGATATGGTCGAATGCTTGTGACGTCTGTTGGGATGAACACAACATGGGGTGAGATGATGAGCACAATCAGCCGCGAAACTAATGAACAGACACCCTTACAAGCTCGGCTTAACAAGCTAACTTCATCAATTGGTAAAGTTGGTTTGGCATTCAATGGCAGCAAAACTAAGGCTGATGATATAGTGAATGCTGTGGTCGGAATCATTGCTGCTGCAGTTACCATTGTGGTCGTTGCCATTCCAGAAGGTTTGCCGTTGGCTGTCACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAGGCTATGGTTCGGAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCCACCACCATTTGTACTGACAAAACAGGTACCCTCACTCTGAACCAGATGAAGCCTTCCTCATTTAAATTCGAGTTTTCTGGTAGTCCCACTGAAAAAGCAATACTTTCTTGGGCTGTCCTGGAACTTGATATGGACATGGAGAGAATGAAGAAGAATTATAACATTCTTCATGTTGAAGCTTTCAATTCGGAGAAGAAGAGGAGCGGGATTTTAATAAGGAAGAAGGCTGACAACACAATCCACGTGCACTGGAAGGGAGCGGCAGAGATGATATTAGCAATGTGTTCCAGTTACTATGACGTCTCTGGAAGCATGAAAGATATGGATGATGGTGAAAGGATGATATTTGAGCAAATAATTCAAGAAGACAGCTTGACCCTTATAGCACTGGTGGGGATAAAGGACCCATGTAGGCCAGGGGTGAGAAAAGCCGTGGAAGATTGCCAATATGCTGGAGTGAATGTTAAAATGATCACTGGCGACAATATTTTCACTGCGAGAGCCATAGCCACTGAATTCGATAAAATCCATGTGATGGCTAGATCCTCTCCCTTTGATAAACTTCTTATGGTACAGTGCTTGAAACAGAAAGGCCATGTGGTCGCAGTCACAGGCGACGGCACAAATGATGCACCGGCATTAAAAGAAGCTGACATAGGACTTTCTATGGGGATACAGGGCACTGAAGTTGCAAAGGAGAGCTCAGATATCATCATTTTAGATGACAATTTTGCTTCTGTAGCCACGGTTTTGAGGTGGGGAAGGTGTGTTTATAACAACATCCAGAAATTCATCCAGTTCCAGCTCACAGTGAATGTTGCAGCCCTTGTAATCAACTTTGTGGCAGCAGCTTCAGCTGGTGAGGTACCACTGACAGCCGTCCAGTTACTATGGGTGAACTTGATCATGGACACATTAGGTGCTCTGGCTCTCGCAACAGAGCGGCCCACCAAGGAACTCATGGAGAAGCCACCTGTGGGTCGAGCTGAGCCCCTCATCACCAACATCATGTGGAGGAATCTATTAGCCCAAGCTCTGTATCAGATAGTCGTACTCTTGACCCTACAATTCAATGGAGAATCAATCTTTGGCAACAAGTTGTTTTTGGGGATCATTGGGATAACCATTATCCTTCAGGTGGTTATGGTGGAGTTTTTGAAGAAATTTGCGGATACAGAGAGGTTGGATTGGGGACAATGGGGTGCATGCATTGGAGTTGCAGCTGCATCTTGGCCAATCGGCTGGCTTGTCAAGTGCATACCTGTTTCAGATAAACCAAAATACTTCGTCTTCATTCACATAAATGTAATGTGTGGTTGGAAATCTGAACAACTTTATCCCTTCTTGTTGGTAGGAAGTTATGGCAGGATGGTAGGGAAGAGATATGATAGTGACGCATCAGCATGGAGAGCAAAGCAGTCGGGTCGACCTTGGATTTTTAATAATTCAAAGCCTCAGGAAATTTATCATATTGTTTTGCCATTGCCAACCATGGAGAGAAAGACTTTAAATTGCAATGAACTCTTTAGGAAGTTCATTGCCAATTTTGATTCCATACAAATCAAGGGTATCGACCAGAACCTAATCAACAACTCATCTACAAGTAACGCTCCTCCACACTCAGCAGGCTGCTATCCTTTTCTTCTTCATTTTCTTGCCTGCGGTGTTGCTTGGACAATAAAACTCATCTCTTGTTTCGGACCTAATGGTATCCTTTTTTGCCATTTGGAAAAAGAATGTCCGGTATTTTGCATGTTGAGTTGCATGGCGTCCTTAGAAAACGTGCCAACTATCCTTAGAAAACCCATCAAGAGATGGCGCTTGGCCTTTGCTACTATCTATTTTTCCAGGACGCTACGCTCTCTTCTCCATCACCCTCTGTCCAATAACAACAGCAGCTGCAGCAAACTCCCCTCCAGTACTCCTCCTTTTTTGGTCCTCGACGTTAAGGCGGACGCTGACTTCTCAAACGTTGATCAAACAAGCCTCACTGCATTAGTGAAGGAGAAAAACTTAGACCAGCTTCTTGGATTTGGAGGAGTTGAAGGTGTGGCTGTTGCTCTACGATCAGATGTCAAAAATGGCATCCATGGTGCTGCAAAGGACGTTGCTTGGAGGCAGGAGGCGTTCGGTTCAAACACATACCCGAGGCCACCTACGAAGAGCTTCTTCCACTTTGTGGTGGAAGCTTTTAAGGATCTTACAATTCTCGTACTTCTAGTCTGTGCCACACTCTCTCTTTGTTTTGGAATTAAAGAGCATGGGCTGAAGGAAGGGTGGTACGACGGTGGAAGCATACTTGTCGCCTTGTCAAAAGTCAGCAACAATATTCAGAGTGACAACGTGGAAGTCAACACCAGCCAGAATCCATTTTTGTTTTCTGGAACCAAGGTAGCTGATGGATATGCTCTAATGCTTGTGACATCTGTTGGCATGAACACAACATGGGGCCAGATGATGAGCACAATCAGCCGCGACACCAATGAACAGACACCCTTACAAGCTCGGCTTAACGAGCTAACTTCATCAATTGGTAAGGTTGGTTTGACAGTTGCATTTCTAGTTCTTGTAACAAAGTCTGATGATGTAGTGAATGCGGTAGTCGGAATCATTGCCTCTGCAGTTAGCATTTTGGTTATGTCAATTCCGGAAGGCTTGCCATTGGCTGTAACACTCACTCTTGCTTATTCAATGAAGAGAATGATGGCTGACCAGGCCATGGTTCGGAAGCTCTCTGCCTGTGAGACCATGGGCTCTGCTACCACCATTTGTACCGACAAAACAGGTACCCTCACTCTGAACCAGATGAAGGTGACAAACATTTACAGGGACACTACAGCTAAACTCGAGTTTTCTGCCTTCAATTCAGAGAAGAAAAGAAGCGGGATTCTAATGAGAAAGAAGACTGACAACACAATCCACGTGCATTGGAAGGGAGCAGCAGAGATGATATTAGCAATGTGTTCAAGTTACTATGATGCTTCTGGAAGGATGAAAGATCTGAATGTTACTGAAAGGATGACATTTGAGCAAATAATTCAAGGCCGGCAAAAGATAAAAGAAGACAGCTTGACCCTTATAGGATTGATGGGGATAAAGGACCCATGTAGACCAGGGGTGAGAAAAGCCGTGGAAGATTGCCAACACGCTGGAGTGAACGTCAAAATGATCACTGGTGACAATGTCTTCACTGCGAGAGCTATAGCTACTGAATTCGATAAAATCTGCGTGATGGCCAGGTCCTCTCCCTTTGATAAACTTCTCATGATACGGTGCTTGAAACAGAAGGGTCATGTGGTTGCAGTGACAGGTGATGGCACAAATGATGCACCAGCATTAAAAGAAGCGGACATAGGACTTTCTATGGGGATACAGGGCACTGAAGTTGCAAAGGAGAGCTCAGATATCATCATCTTGGATGATAATTTTGCTTCGGTGGCAATGGTTTTGAGTCCCATTGACAGCAGTGCAACTGTTGTGGCCCAAGCTTTGTATCAGATAGCTGTCCTCTTGACCCTACAGTTCAAAGGAGGATCAATCTTTGGTGTGAAAGACAAGATAAAGAACACCCTGATATTCAATACTTTTGTGCTATGCCAAGTCTTCAACGAATTCAATGCAAGGAAGCTGGAGAAGAAGAATATCTTTAAGGGGATACACAAAAACAAGTTATTTTTGGGGGTCATTGGGATAACCGTTATCCTTCAGGTTGTCATGGTTGAATTTTTGAACAAATTTGCAGATACGGAGAGGTTGGATCGGGGACAATGGGAGGCCTGCATTGCCATTGCAGCCATGTCTTGGCCAATTGGCTTTGTTGTCAAGTGCATACCTGTTTCAGAAAAACCATTTCTTAGATATCTAAAGTGGTAG 5199 44.14 MMSQVGPKEDNEDSNFPFFFLPRWHPVLPLCLFDHKIHLLFQFFFQSCYPFLSFENIMSNILHVNLSSIGSLLDVPSTLSKPSKRWHLAFATIYCSRALHSLLNDPLSNNKNKSRKLLLNTPPFVALDVKPCSGFSDIDQTSLTDLVKAKNLDQLLELGGVEGVAEALKADFKNGIHGDVQDVARRKQEFGSNTYQKPPPKSILHFVEGWYDGGSIFLAVFLVISVSAVSNFKQNRQFDKLSKVSNNIQVDVVRQGRRQQISIFEIVVGDVVCLKIGDQVPADGLFLDGHSLQVNESSMTGESDHVEVNTSLNPFLFSGTKIADGYGRMLVTSVGMNTTWGEMMSTISRETNEQTPLQARLNKLTSSIGKVGLAFNGSKTKADDIVNAVVGIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKPSSFKFEFSGSPTEKAILSWAVLELDMDMERMKKNYNILHVEAFNSEKKRSGILIRKKADNTIHVHWKGAAEMILAMCSSYYDVSGSMKDMDDGERMIFEQIIQEDSLTLIALVGIKDPCRPGVRKAVEDCQYAGVNVKMITGDNIFTARAIATEFDKIHVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFVAAASAGEVPLTAVQLLWVNLIMDTLGALALATERPTKELMEKPPVGRAEPLITNIMWRNLLAQALYQIVVLLTLQFNGESIFGNKLFLGIIGITIILQVVMVEFLKKFADTERLDWGQWGACIGVAAASWPIGWLVKCIPVSDKPKYFVFIHINVMCGWKSEQLYPFLLVGSYGRMVGKRYDSDASAWRAKQSGRPWIFNNSKPQEIYHIVLPLPTMERKTLNCNELFRKFIANFDSIQIKGIDQNLINNSSTSNAPPHSAGCYPFLLHFLACGVAWTIKLISCFGPNGILFCHLEKECPVFCMLSCMASLENVPTILRKPIKRWRLAFATIYFSRTLRSLLHHPLSNNNSSCSKLPSSTPPFLVLDVKADADFSNVDQTSLTALVKEKNLDQLLGFGGVEGVAVALRSDVKNGIHGAAKDVAWRQEAFGSNTYPRPPTKSFFHFVVEAFKDLTILVLLVCATLSLCFGIKEHGLKEGWYDGGSILVALSKVSNNIQSDNVEVNTSQNPFLFSGTKVADGYALMLVTSVGMNTTWGQMMSTISRDTNEQTPLQARLNELTSSIGKVGLTVAFLVLVTKSDDVVNAVVGIIASAVSILVMSIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTNIYRDTTAKLEFSAFNSEKKRSGILMRKKTDNTIHVHWKGAAEMILAMCSSYYDASGRMKDLNVTERMTFEQIIQGRQKIKEDSLTLIGLMGIKDPCRPGVRKAVEDCQHAGVNVKMITGDNVFTARAIATEFDKICVMARSSPFDKLLMIRCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIIILDDNFASVAMVLSPIDSSATVVAQALYQIAVLLTLQFKGGSIFGVKDKIKNTLIFNTFVLCQVFNEFNARKLEKKNIFKGIHKNKLFLGVIGITVILQVVMVEFLNKFADTERLDRGQWEACIAIAAMSWPIGFVVKCIPVSEKPFLRYLKW* 1733
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 5884387 5899015 - Vvi5g569 Vvi5g569 786711
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g569 1732 SUPERFAMILY Calcium ATPase, transduction domain A 247 346 IPR008250 -
Vvi5g569 1732 Gene3D - 235 348 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 1601 1708 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 208 463 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 615 806 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 461 563 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 1457 1513 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 563 614 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 807 851 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 1514 1592 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 1220 1382 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 1391 1457 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 1029 1212 - -
Vvi5g569 1732 PANTHER CATION TRANSPORTING ATPASE 66 207 - -
Vvi5g569 1732 ProSitePatterns E1-E2 ATPases phosphorylation site. 1368 1374 IPR018303 -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 461 563 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 563 614 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 1029 1212 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 807 851 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 1514 1592 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 1220 1382 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 1391 1457 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 66 207 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 615 806 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 1601 1708 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 208 463 - -
Vvi5g569 1732 PANTHER CALCIUM-TRANSPORTING ATPASE 1457 1513 - -
Vvi5g569 1732 Gene3D - 465 561 IPR023299 GO:0000166
Vvi5g569 1732 Gene3D - 1595 1721 - -
Vvi5g569 1732 PRINTS H+-transporting ATPase (proton pump) signature 646 662 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi5g569 1732 PRINTS H+-transporting ATPase (proton pump) signature 678 703 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi5g569 1732 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 216 726 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi5g569 1732 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1265 1593 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi5g569 1732 SUPERFAMILY HAD-like 444 751 IPR036412 -
Vvi5g569 1732 Gene3D - 579 614 IPR023214 -
Vvi5g569 1732 Gene3D - 1515 1588 IPR023214 -
Vvi5g569 1732 Gene3D - 617 691 IPR023214 -
Vvi5g569 1732 Gene3D - 443 455 IPR023214 -
Vvi5g569 1732 Gene3D - 1478 1513 IPR023214 -
Vvi5g569 1732 Pfam Cation transporter/ATPase, N-terminus 159 206 IPR004014 -
Vvi5g569 1732 Pfam Cation transporter/ATPase, N-terminus 1122 1188 IPR004014 -
Vvi5g569 1732 Pfam haloacid dehalogenase-like hydrolase 1363 1559 - -
Vvi5g569 1732 Pfam haloacid dehalogenase-like hydrolase 443 660 - -
Vvi5g569 1732 SUPERFAMILY HAD-like 1364 1593 IPR036412 -
Vvi5g569 1732 SUPERFAMILY Calcium ATPase, transmembrane domain M 1121 1721 IPR023298 -
Vvi5g569 1732 SUPERFAMILY Calcium ATPase, transduction domain A 1222 1264 IPR008250 -
Vvi5g569 1732 Gene3D - 1168 1386 - -
Vvi5g569 1732 SFLD Haloacid Dehalogenase 1364 1589 - -
Vvi5g569 1732 SFLD Haloacid Dehalogenase 428 699 - -
Vvi5g569 1732 SUPERFAMILY Calcium ATPase, transmembrane domain M 158 865 IPR023298 -
Vvi5g569 1732 Pfam E1-E2 ATPase 249 424 - -
Vvi5g569 1732 Pfam E1-E2 ATPase 1226 1344 - -
Vvi5g569 1732 Gene3D - 800 867 - -
Vvi5g569 1732 Gene3D - 564 578 IPR023299 GO:0000166
Vvi5g569 1732 Gene3D - 1420 1477 IPR023299 GO:0000166
Vvi5g569 1732 SMART Cation_ATPase_N_a_2 1119 1193 IPR004014 -
Vvi5g569 1732 Pfam Cation transporting ATPase, C-terminus 802 861 IPR006068 -
Vvi5g569 1732 Pfam Cation transporting ATPase, C-terminus 1601 1718 IPR006068 -
Vvi5g569 1732 Pfam Cation transporting ATPase, C-terminus 731 801 IPR006068 -
Vvi5g569 1732 Gene3D - 208 442 - -
Vvi5g569 1732 Gene3D - 692 794 - -
Vvi5g569 1732 PRINTS P-type cation-transporting ATPase superfamily signature 295 309 - -
Vvi5g569 1732 PRINTS P-type cation-transporting ATPase superfamily signature 446 460 - -
Vvi5g569 1732 PRINTS P-type cation-transporting ATPase superfamily signature 571 582 - -
Vvi5g569 1732 PRINTS P-type cation-transporting ATPase superfamily signature 593 603 - -
Vvi5g569 1732 PRINTS P-type cation-transporting ATPase superfamily signature 646 665 - -
Vvi5g569 1732 PRINTS P-type cation-transporting ATPase superfamily signature 670 682 - -
Vvi5g569 1732 ProSitePatterns E1-E2 ATPases phosphorylation site. 448 454 IPR018303 -
Vvi5g569 1732 SFLD p-type atpase 428 699 IPR044492 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g569 K01537 - vvi:100254645 1449.11