Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g66 ATGAATCTTGATTCCCATGTGTTGTTTTGTCTCGTTTTCTTCTCTTTCGTCGTCAACCCCGTTCATGTACTGAGCGGCAGCTCTGAATCGGACTCTGTTTCGTTTATCTTGAGTTGTGGGGATTCCAGCGGTGGCGCTGATGCTGATGGGCGGAAGTGGGTTCCGGACACTAAGTTTCTGGCCTCCCCAGGGAAATCCATTTCGGCCACAGCACAACTCCAAGACCCTTCGCTGCCTTCTCCCGTTCCTTACATGTCTGCTAGGATTTTCACATCAGAATCCACCTACCAATTCTCAGTTTCTCCTAAGAATCGCCTCTGGGTCAGACTCCATTTTTACCCATCTTTTTACAGTGCTCTCAATGCTTCCGACAGCTTTTTCTCGGTCACTGCCGGTGGCTTCACCCTCCTTAACAATTTCAGTGCCTCCACCACAGCCCAAGCTCTCACACAGGCTTATATCATCAAAGACTTCTCTCTCATGCCCCCGGAATCTGGCCATCTCAATATCACATTCAAGCCTTCTCCAAATCACAATGGATCGTATGCTTTTATCAATGGGATTGAAGTAATTTCCATGCCGGATATATTTGGATCCGCAACTATGGTTGGGTACTCCGACTTGGATGCTGCCGGCTCTTCATTGCAGACCATGTATCGGTTGAATGTTGGTGGACAGTACATTGCAGCCAATAATGACTCTGGGCTAAGCCGGACATGGTATGATGATTCCCCATATCTGTATGGGGCTGCCTTTGGGGTCACTTCTGAAGCTGATAGCAATGTTACCATTCAATATCCTTCGCATGTGCCTGAGTATATTGCCCCAGTTGATGTGTACAGAACAGCAAGAACAATGGGTCCAGACCCAAAGATCAATCAGAATTATAATCTGACATGGGTGTTTCAGGTTGATGCCAATTTCACATACATTGTCAGGTTTCATTTCTGTGAGTTTCTGCTTTCCAAGATCAACCAGAGGGTGTTTGATATTTATGTTAACAACCAAACAGCACAGCCAGCTGCTGATTTGATTGCTTGGGCTGAATCAGAGGGAGTGCCGGTTTACAAGGATTTTGCTGTATTTGTTAAAGATGAACCTGGTGATGAACAACTATGGGTGGCATTACACCCATCTGTATCAATGAAGCCTGAATTCTATGATGCAATTCTCAATGGATTGGAGATCTTTAAGCTTAACGACTCAAATGGGAATTTAGCAGGTCCAAATCCTGTGCCATCACCCATGCTGGTTAAGGCTGAGGAGACGAGGAATTTCGCCTCACCAGAGTCTAGTGACAATGCTCAAGTCATAGGTGGGATTGCTGGAGGAGCTGCAGGGTTGGTGGTGGTTGTTGCAGTTGTTGCTGTTATAGCTTTCCGAAGGAAGAAAATGCTTGACAGAAGTGGTTCCAGGACAAGTGGGTGGTTGCCAGTTCATGGCAGCTCTGGCACAACAGCAAGCAAGTCTACTATCTCAGGCAAGAGCACTGCCAGTAGCCACTTGTCTTCCATGGCGGCAGCTCTTTGTCGGCATTTCACGTTGGCAGAAATGAGGCATGGCACCAAGAACTTTGACGAGTCACAGGTAATTGGGGTTGGAGGATTTGGGAAGGTTTATAAAGGGGTTGTGGATGGGAGCACAAAAGTTGCAATTAAAAGATCAAACCCTTCTTCAGAGCAAGGTGTTCATGAGTTCCAGACTGAAATTGAGATGCTTTCAAAGCTGAGACATAGGCATTTAGTCTCTCTTATTGGTTATTGTGAAGAAGATAATGAGATGATTCTGGTTTATGATTACATGGCCAATGGGACTCTGAGGGAGCATCTTTATAAGAGCGATAAACCTCAATTGTCATGGAAGCAGAGGTTGGAAATTTGTATTGGAGCTGCCAGGGGACTTCACTATCTTCACACTGGGGCCAAGTACACTATCATTCACAGGGATGTGAAGACTACGAACATTCTTCTGGATGAGAAGTGGGTAGCAAAAGTTTCAGATTTTGGGCTCTCAAAAACAGGCCCTGAACTCAATCAAACTCATGTTAGTACAGTGGTTAAGGGCAGCTTTGGGTACTTGGATCCTGAGTACTTCCGGAGACAACAATTGACAGAAAAATCTGATGTTTACTCCTTTGGGGTAGTACTTTTTGAGGCATTGTGTGCAAGGCCAGCCCTCAATCCCAGCCTTCCTAAGGAACAAGTTAGTCTTGCAGATTGGGCGCTACAATGCCAAAAGAAGGGAATTCTCGAGGAAATCATCGATCCCCATCTTAAGGGAAATATCACTCCTGAGTGCTTGATGAAATTTGCAGAGACTGCCGAGAAGTGCCTGTCTGATCATGGCCTTGAGCGACCTTCAATGGGCGACGTACTCTGGAACCTTGAGTTTGCCCTCCAATTGCAGGAGAAACCCCAAGGAGCAAAAATTGATGTAGAGAAGGTGAATGCCGACATCAATGCAATGCATAGAAGCATGTTGAGCATTGATGAGGAGAGTGCAGTTAGTGAGGATACTGAGGACTTAAGCACAAGTGAAGTGTTCTCACACATGGTGAACCCAAAAGGGAGATGA 2574 45.88 MNLDSHVLFCLVFFSFVVNPVHVLSGSSESDSVSFILSCGDSSGGADADGRKWVPDTKFLASPGKSISATAQLQDPSLPSPVPYMSARIFTSESTYQFSVSPKNRLWVRLHFYPSFYSALNASDSFFSVTAGGFTLLNNFSASTTAQALTQAYIIKDFSLMPPESGHLNITFKPSPNHNGSYAFINGIEVISMPDIFGSATMVGYSDLDAAGSSLQTMYRLNVGGQYIAANNDSGLSRTWYDDSPYLYGAAFGVTSEADSNVTIQYPSHVPEYIAPVDVYRTARTMGPDPKINQNYNLTWVFQVDANFTYIVRFHFCEFLLSKINQRVFDIYVNNQTAQPAADLIAWAESEGVPVYKDFAVFVKDEPGDEQLWVALHPSVSMKPEFYDAILNGLEIFKLNDSNGNLAGPNPVPSPMLVKAEETRNFASPESSDNAQVIGGIAGGAAGLVVVVAVVAVIAFRRKKMLDRSGSRTSGWLPVHGSSGTTASKSTISGKSTASSHLSSMAAALCRHFTLAEMRHGTKNFDESQVIGVGGFGKVYKGVVDGSTKVAIKRSNPSSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEDNEMILVYDYMANGTLREHLYKSDKPQLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPELNQTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPSLPKEQVSLADWALQCQKKGILEEIIDPHLKGNITPECLMKFAETAEKCLSDHGLERPSMGDVLWNLEFALQLQEKPQGAKIDVEKVNADINAMHRSMLSIDEESAVSEDTEDLSTSEVFSHMVNPKGR* 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 749323 751897 + Vvi5g66 Vvi5g66 786208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g66 857 MobiDBLite consensus disorder prediction 471 495 - -
Vvi5g66 857 SMART serkin_6 525 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi5g66 857 Pfam Protein tyrosine and serine/threonine kinase 528 792 IPR001245 GO:0004672|GO:0006468
Vvi5g66 857 Gene3D Phosphorylase Kinase; domain 1 484 600 - -
Vvi5g66 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Vvi5g66 857 PANTHER RECEPTOR-LIKE PROTEIN KINASE ANXUR2 26 821 - -
Vvi5g66 857 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Vvi5g66 857 Pfam Malectin-like domain 37 398 IPR024788 -
Vvi5g66 857 SUPERFAMILY Protein kinase-like (PK-like) 499 798 IPR011009 -
Vvi5g66 857 Gene3D Transferase(Phosphotransferase) domain 1 601 821 - -
Vvi5g66 857 PANTHER OS07G0166700 PROTEIN 26 821 IPR045272 GO:0004714|GO:0006468
Vvi5g66 857 ProSiteProfiles Protein kinase domain profile. 525 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi5g66 857 Gene3D - 30 193 - -
Vvi5g66 857 Gene3D - 214 400 - -
Vvi5g66 857 MobiDBLite consensus disorder prediction 475 495 - -
Vvi5g66 857 CDD STKc_IRAK 531 796 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76674 PF12819 Malectin_like 5.40E-41 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g66 - - vvi:100260108 1628.22