Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g700 ATGCCCCTTTATGGATCATTTGAAGCCCTCATAGAACAGGCCACAATCCTGGTCATCCTCACCACAATCACTTCCCTTTCTCTCCTCTCTCCTCTCTCCTCTCTACTCTCTCCTCCTCGAGCTCTAAAGTCAGGAAAGCTTTCCAGAGCTGTTGGAAGAAGACTACTACTAGTAATACAAGTAGTAGATCTAGCCATGGCGAGAGAACAATTGCAAGTGCTTAGTGCACTTGATTTGGCGAGAACCCAATTGTACCATTTTACTGCAATCGTGATTGCTGGAATGGGTTTCTTTACGGATGCTTACGATCTCTTTAGCATTTCTCTCGTCACGAAATTACTTGGCCGCATATACTACCATCTCTTCTTCGGATGGCTTGGTGACAAAATGGGAAGGAAGAGCGTCTATGGCATAACCCTTATTCTCATGGTTGTTTGCTCCGTTGCCTCGGGGCTTTCTTTTGGAAATGAACGAAAGGGTGTCATGGCCACTCTTTGTTTCTTCCGATTCTGGCTTGGCTTTGGCATTGGTGGTGATTATCCCCTTTCCGCCACTATCATGTCGGAATATGCCAACAAGAAGACCCGCGGGGCCTTTATCGCTGCAGTGTTCGCCATGCAGGGGTTTGGAATTTTGGCTGGCGGGATAGTTTCACTCATTGTTTCAGCTGCATTTGATCACAGCTTCAACGCACCCTCCTATGAAAAAGACCCAGTTGGCTCCACTGTGAAACAAGCTGATTATGTTTGGCGAATTATTTTGATGTTTGGAGCTGCTCCTGCCGCTCTGACATACTACTGGCGGATGAAGATGCCTGAGACGGCTCGTTACACTGCGCTCGTTGCCAAGAATGCAAGGAAGGCAGCTGCTGACATGTCTAAGGTTTTGCAGGTGGACATCGAAGCCGAAGAGACCAAGGTGGAGAATACTTGGTTTTTGTTGGACATTGCTTTCTACAGTCAGAATCTCTTCCAGAAGGACATCTTCAGTGCAATTGGATGGATTCCAAAAGCCGAGACCATGAATGCAATTCATGAAGTTTTTAGAATTGCCAAGGCTCAAACCTTAATTGCACTATGCAGTACTGTTCCAGGGTACTGGTGTACAGTGATTTTCATTGATTATATGGGGAGGTTTGCTATTCAACTGATGGGTTTCTTCTTCATGACCGTGTTCATGTTTGCGCTTGCTATTCCTTACCATCACTGGACTTTAGCGCCCAACCGAATCGGGTTCGTCGTAATGTACTCATTGACCTTCTTCTTTGCAAATTTTGGACCCAATGCAACCACCTTTGTACCAAGACAAAACTCAGACGGATGCAGGCTACCCACCTGGTATTGGAATGAGAAATTCGCTCATTCCCTGAATTGGACATGCAGCCTCCTACTAATAGGACCGTTCCAGTGTAATTTGTGTGGGTTTCATAAAGATGTCGAAGTACTACTACATTCAATATTCAAAGTCAAGGCTGGCTCTTATGTTTTCATTGTGCAATACAATTTCGTAGATGTTTGCTTTGAATACTTGAATTCAAAAGCAACCATATGTATGGTGAATTTTGTTAAACGTACGTTTATATACATTATCCATACTTCGTGTTCATCTTCTTCTTTTTCCGACCTTTGA 1629 44.38 MPLYGSFEALIEQATILVILTTITSLSLLSPLSSLLSPPRALKSGKLSRAVGRRLLLVIQVVDLAMAREQLQVLSALDLARTQLYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYYHLFFGWLGDKMGRKSVYGITLILMVVCSVASGLSFGNERKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVSLIVSAAFDHSFNAPSYEKDPVGSTVKQADYVWRIILMFGAAPAALTYYWRMKMPETARYTALVAKNARKAAADMSKVLQVDIEAEETKVENTWFLLDIAFYSQNLFQKDIFSAIGWIPKAETMNAIHEVFRIAKAQTLIALCSTVPGYWCTVIFIDYMGRFAIQLMGFFFMTVFMFALAIPYHHWTLAPNRIGFVVMYSLTFFFANFGPNATTFVPRQNSDGCRLPTWYWNEKFAHSLNWTCSLLLIGPFQCNLCGFHKDVEVLLHSIFKVKAGSYVFIVQYNFVDVCFEYLNSKATICMVNFVKRTFIYIIHTSCSSSSFSDL* 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7925221 7933404 + Vvi5g700 Vvi5g700 786842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g700 542 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 542 IPR020846 GO:0022857
Vvi5g700 542 Gene3D MFS general substrate transporter like domains 85 435 IPR036259 -
Vvi5g700 542 Pfam Sugar (and other) transporter 112 430 IPR005828 GO:0016021|GO:0022857|GO:0055085
Vvi5g700 542 SUPERFAMILY MFS general substrate transporter 77 433 IPR036259 -
Vvi5g700 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 121 309 - -
Vvi5g700 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 69 120 - -
Vvi5g700 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 309 433 - -
Vvi5g700 542 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 121 309 - -
Vvi5g700 542 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 69 120 - -
Vvi5g700 542 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 309 433 - -
Vvi5g700 542 CDD MFS_PhT 90 433 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g700 K08176 - vvi:100245922 701.819