Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g75 ATGGCGTTCTGGTGGCCTTTGCTCGTTCTCGGATTTGCTTTCGCTCTCTGTAGATTCCTCTTGATGCTCATTCCGCCCAATGTACCTTCCATTGATGTAGACGCTTCTGATGTGTTGGACGATGGAAAGACCAAGGAGAACTCTTTCATCTATATACCTTCAAGGGGAAGGACACCTGAGAAAGTTCAGTGTTATGAGCCTGCAACGATGAAATACTTGGGATTCTGCCCTGCTTTGCGACCTGATGAGGTAAGAGAACATGTGGCACAGGCAAGGAAGGCTCAGAAAATATGGGCTCGGAGTAGCTTCAAGCAAAGACGACAATTTCTACGGATACTTCTCAAATATATTATCGAACATCAAGAGCTTATATGCGAGATCTCATCACGTGATACTGGAAAAACAATGGTTGATGCTTCTTTGGGAGAAATAATGACAACTTGTGAGAAGATCACCTGGCTTCTTTCAGAGGGTGAGAGGTGGTTAAAGCCTGAATACCGGTCTACTGGAAGGTCAATGCTTCACAAGACAGCCAAAGTGGAATTTCATCCCCTTGGTGTGATTGGTGCCATTGTCTCATGGAACTATCCATTTCATAATATCTTTAACCCAATGCTGGCAGCAGTCTTTTCAGGAAATGGTGTTGTGATAAAGGTTTCAGAACATGCTAGTTGGTCTGGATGTTTCTATTTGCGAATAATCCAGGCAGCCCTGGCTGCTGTTGGAGCTCCTGAAAATCTGGTTGATGTAATAACAGGGTTTGCTGAAACAGGAGAAGCACTAGTGTCTTCAGTTGACAAGATCATATTTGTTGGATCACCTGGTGTGGGTAAAACGATAATGAGAAATGCTTCTGATACACTGATCCCAGTAACACTTGAGCTTGGTGGAAAAGATGCATTTATTGTGTGTGAAGATGTAGACGTGCCTCATGTTGCACAAATTGCTGTTAGGGCTGCACTTCAATCTAGTGGACAGAACTGTGCTGGGGCTGAGAGATTTTATGTTCATCAGGACATTTATTCTAAATTTGTTGCTGAAGTAGTCAGAATTGTAAAATCCGTTACTGCTGGCCCTCCACTTTCCGGAAAGTATGACATGGGAGCCATATGCATGCAAGAGCATTCTGAAAAGCTTCAAAACCTTGTTAATGAAGCATTAGACAAAGGAGCAGAATTTGCTGGTCGTGGAAGTTTTGGCAATTTAGGTGAAGATGCAGTGGATCAATTCTTTCCTCCCACTGTGCTTGTAAATGTAAACCACTCAATGCAGTTGATGCAAGAAGAGGCATTTGGACCCATATTACCTATAATGAAATTTAGCTCTGATGAAGAGGTTGTCAAACTTGCAAATGATTCAAGATATGGGCTTGGGTGTGCAGTGTTTTCTGGCAGTCAGCGCCGCGCCAAAGCAATTGCCTCTCAGATACACTGTGGAATGGCTGCCATCAACGACTTTGCATCAACTTACATGTGCCAGTCTTTGCCATTTGGAGGTGTCAAAGACAGTGGATTTGGAAGATTTGCTGGCATAGAAGGATTGCGAGCTTGCTGTCTCGTAAAATCGGTTGTGGAGGACAGGTGGTGGCCATTCATCAAAACTAAGATTCCCAAGCCTATTCAGTATCCTGTAGCGGACAATGGTTTTGAGTTCCAGGAGTCACTTGTAGAGGCGCTTTATGGCTTGAATGTGTGGGATCGTTTACGAGCATTGGTCCATGTCCTAAAGATGCTTACAGAACAGAACACCCCTAGCAACAGCACCAAGAGAAAAAATGACTGA 1782 43.83 MAFWWPLLVLGFAFALCRFLLMLIPPNVPSIDVDASDVLDDGKTKENSFIYIPSRGRTPEKVQCYEPATMKYLGFCPALRPDEVREHVAQARKAQKIWARSSFKQRRQFLRILLKYIIEHQELICEISSRDTGKTMVDASLGEIMTTCEKITWLLSEGERWLKPEYRSTGRSMLHKTAKVEFHPLGVIGAIVSWNYPFHNIFNPMLAAVFSGNGVVIKVSEHASWSGCFYLRIIQAALAAVGAPENLVDVITGFAETGEALVSSVDKIIFVGSPGVGKTIMRNASDTLIPVTLELGGKDAFIVCEDVDVPHVAQIAVRAALQSSGQNCAGAERFYVHQDIYSKFVAEVVRIVKSVTAGPPLSGKYDMGAICMQEHSEKLQNLVNEALDKGAEFAGRGSFGNLGEDAVDQFFPPTVLVNVNHSMQLMQEEAFGPILPIMKFSSDEEVVKLANDSRYGLGCAVFSGSQRRAKAIASQIHCGMAAINDFASTYMCQSLPFGGVKDSGFGRFAGIEGLRACCLVKSVVEDRWWPFIKTKIPKPIQYPVADNGFEFQESLVEALYGLNVWDRLRALVHVLKMLTEQNTPSNSTKRKND* 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 817347 826514 - Vvi5g75 Vvi5g75 786217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g75 593 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 61 521 IPR016162 GO:0016491
Vvi5g75 593 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 558 - -
Vvi5g75 593 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 301 496 IPR016163 GO:0016620
Vvi5g75 593 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 558 - -
Vvi5g75 593 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 321 332 IPR016160 GO:0016491
Vvi5g75 593 SUPERFAMILY ALDH-like 58 525 IPR016161 GO:0016491
Vvi5g75 593 CDD ALDH_F15-22 65 527 - -
Vvi5g75 593 Pfam Aldehyde dehydrogenase family 60 523 IPR015590 GO:0016491
Vvi5g75 593 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 293 300 IPR029510 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g75 - - vvi:100249882 1197.19