Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g771 ATGGAGAGCGGCGCAGCACCAACGGAGGCGGCCAAGCAGCCACACAGGCTGGAGAGGAAGTGGACCTTCTGGTTCGATAACCAGTCCAAGCCCAAGCAAGGCGCGGCTTGGGGGACCTCTCTTCGCAAGGCTTACACCTTCGAAACCGTCGAAGAATTTTGGTGTCTGTATGATCAGATATTTAAGCCCAGCAAGTTGCCAGCCAATGCAGATTTCCATTTGTTCAAAGCTGGGGTTGAACCAAAATGGGAAGATCCTGAGTGTGCAAATGGAGGCAAATGGACTGTTGCCAGCAGCCGAAAGGGTAATCTTGATACCATGTGGCTAGAAACGTTGATGGCCTTAATTGGGGAGCAATTTGATGAGGCTGATGAAATATGTGGTGTGGTTGCAAGTGTACGTCAAAGGCAGGATAAGCTTGCTCTGTGGACTAAGACAGCAACCAACGAGGCTGCTCAGATGAGCATTGGAAGGAAGTGGAAGGAGGTCATTGATGTCACTGATAAGATCACTTACAGCTTTCATGATGATTCCAGAAGGGAAAGATCAGTCAAAGTTCGATACAACGTGTGA 573 49.04 MESGAAPTEAAKQPHRLERKWTFWFDNQSKPKQGAAWGTSLRKAYTFETVEEFWCLYDQIFKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVASSRKGNLDTMWLETLMALIGEQFDEADEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEVIDVTDKITYSFHDDSRRERSVKVRYNV* 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9208761 9219691 - Vvi5g771 Vvi5g771 786913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g771 190 Pfam Eukaryotic initiation factor 4E 17 171 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi5g771 190 Gene3D RNA Cap, Translation Initiation Factor Eif4e 6 190 IPR023398 -
Vvi5g771 190 SUPERFAMILY eIF4e-like 10 182 IPR023398 -
Vvi5g771 190 ProSitePatterns Eukaryotic initiation factor 4E signature. 71 94 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vvi5g771 190 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 10 182 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi5g771 190 PANTHER BNAA05G12740D PROTEIN 10 182 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g771 K03259 - vvi:100259631 399.823