Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g811 ATGCAGTCTGTTCCAGTCAAAGTAGTGGTTGGGTCTCACGTTTGGGTGGAGGACCCTGAGATAGCTTGGATAGATGGAGAAGTTGTGGAAGTTAATGGTGAAGAAATTAAAATAATCTGTACATCAGGGAAGACGATTGTTGCCAATCCATCCGATGTCTACCCAAAAGATACTGAAGCTCCTCCACATGGCATCGATGATATGACAAAGCTGGCTTATCTGCACGAACCAGGGGTTCTGCAGAATTTGAGATGTCGATATGATATTAATGAAATTTATACTTATACAGGAAGTATATTGATTGCCGTGAACCCTTTTCAGAGACTGCCTCATTTGTATGATAATCATGTGATGGAGCAGTATAAAGGGGCAGTCTTTGGTGAGCTGAGCCCACATCCTTTTGCTGTTGCTGATTCTGCTTACCGACTGATGATTAATGACGGAGTGAGCCAGTCCATTTTGGTAAGTGGAGAAAGCGGAGCTGGTAAGACAGAAAGCACGAAAATGCTTATGCAATATCTTGCCTATATGGGTGGGAGGGCTGCAGCTGAGGGGCGGACAGTGGAGCAGCAAGTCTTAGAGTCCAATCCTGTTCTAGAAGCGTTTGGTAATGCAAAGACTGTCAGAAACAATAACTCTAGTCGATTTGGTAAGTTCGTGGAGATTCAGTTTGATCAAAGGGGAAGGATTTCAGGAGCTGCTATCAGGACTTATTTACTGGAGCGATCTCGTGTTTGTCAAGTATCCGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCACCTGAGGATGTTGAGAAGTACAAATTGGGAGATCCAAGAACATTTCACTATCTAAATCAGTCAAATTGTTATGAGTTAGATGGAGTGAATGATTCAAAAGAGTACCTTGCAACTAGGAGAGCCATGAATGTTGTTGGGATCAGTTCTGTTGAGCAGGATGCAATATTCCGAGTTGTGGCTGCAGTTCTCCATTTAGGCAACATTGAGTTTGCAAAGGGACAGGAAATAGATTCTTCTGAACCGAAGGATGATAAATCTCGGTTCCATCTTAGAATGGCAGCTGAGCTTTTTATGTGTGATGAGAAGTCTCTTGAGGACTCCCTCTGCAAACGTGTGATTGTGACTCGTGATGAGACCATAACAAAATGGCTTGATCCGGACTCCGCAGCTGTCAGTAGAGATGCTCTGGCCAAAATTGTTTATTCCAGATTATTTGATTGGATTGTGGACAAGATCAATAATTCTATTGGGCAAGATCCTGATTCAAAAGTCTTAATTGGGGTTCTGGATATTTATGGATTTGAGAGTTTCAAGACAAACAGTTTTGAGCAATTTTGTATCAATTTGACAAATGAGAAACTGCAGCAACATTTCAATCAGCATGTATTCAAGATGGAACAAGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATAGATTATGTTGATAATCAAGATATTCTTGATCTCATTGAGAAGAAACCTGGTGGCATCATTGCTCTTCTGGATGAGGCATGTATGTTTCCAAGGTCAACGCATGAGACATTTTCACAGAAGCTTTACCAAACATTTAAAAGTCATAAACGCTTCAGCAAGCCAAAGTTGTCACCTACTGACTTCACCATTTATCACTATGCTGGTGATGTCACATATCAAACTGAGCACTTCCTGGATAAAAACAAAGATTATGTTGTTGCTGAGCATCAATCACTTCTGAGTGCTTCCAGGTGCTCCTTCGTGGCAGACTTGTTCCCACCTTTACCAGAGGAGTCTTCCAAAACATCGAAGTTCTCATCAATAGGTTCTCGGTTTAAGCAACAATTGCAATCTTTGCTTGAAACACTGAGTGCCACTGAGCCACATTACGTTCGCTGTGTGAAGCCAAATAATCTTCTTAAGCCATCAATCTTTGAGAATAATAATGTTCTACAGCAACTACGTTGTGGGGGTGTCTTGGAAGCAATTAGGATCAGTTGTGCTGGATTTCCCACAAGAAGAACATTTGTTGAGTTCATTGCTCGTTTTGGCATCCTTGCACCTGATGTCTTGAAGGGGAGCTGTGATGAGGTTACTACTTCCAAGAGGATTCTGGAGAAGGTGGACCTTAAAGGGTATCAGATTGGTAAAACAAAAGTGTTTCTTAGAGCTGGTCAGATGGCAGAACTAGATGCTCGTAGGAATGAGGTTTTAGGAAGATCTGCTAGCATTATCCAGAGAAAAGTTCGTTCATATCTAAGTCGTAAAAGCTTTGTCTTGTTGCGGCAATCTGCCATACAAATTCAAGCCTCATGTCGAGTTCAAGTTGCATGCCATCGTTATGAAAAAATGAGGAAGGAAGCTGCATGTCGGACGATCCAAAAAGACTTGCGCATGTATCTTGCTAGGAAAGCTTACAACAGGTTTTGCTCTTCAGCTCTTTCTATTCAAACAGGTATGCGAGCGATGGGTGCTTGTAATGAGCTTCGTTTCAGGAAGCAGACTAAAGCTGCAATTATTATCAAGAGTCGATGCCGAGGATACTTAGCCCACCTTCATTATCTGAGGATAAAGAAAGCAGCAATTTCAACACAATGTGCCTGGAGAGGAAAAGTTGCCCGTAGAGAACTACGGAAGCTTAAAATAGCTGCTAAGGAAACTGGTGCTCTCCAAGCTGCTAAAACTATGCTGGAAAAGCAAGTTGAAGAGCTGACCTGCCAACTCCAGCTGGAGAAACGCATGAGGAATATATGTTTTTGTTGTTTGAGTTATTTCTTACCTGACCCTAGTGCTATACTTGAAGTTGGTTGTGTCAACAGATTTCTTATATATAGCCTGTGGGTTTTAATACCTATTATAATTCAAGAACGATGGATAAATAATTTAGAAAGAAAAGGAACAACAATTAAACAAGAGATAAGGAGTGCTAAGCATGATGAAATAAAAGATACAAACTACAGTGTCCTTGGCTCCCTCTACCATAAAGTTGTTTTGAAGTCTAGTGAGCTATACTTGAGCCTTCCAACGAAAAATAACCTTTTGATGACAGAAAGAACCTTGGAATCTCTATCTTTAGATTTCTCTTGTTTATCTGCTTTGCTATTATCAGTTAGGGTTTGTCAGGCTTTTGGTCATATGCTTCCAGAACAATGCAGAAAGAGCAGTAGCCTTTTTTCAAGACGGGATGTTGATTTTTGCCTTGTCTACCATAAGCATTATTATGTGATATATGCAGAAAAATTGGTTAAAGCATCACTAATGTTCTGGGATGTATCCACTTTATTCCAGGCTGACATTGAGGAAGCCAAAACACAGGAAAATGCAAAACTGCAGAATGCTTTGCAAGAGATGCAAGTTCAATTTCAAGAAACTAAAGAAATGCTTATCAAAGAACGTGAGAATGCAAAAAAAGCAGATGAGAAAGTACCTATCATACAAGAGGTTCCAGCTATTGATCATGAAATGATGAATAAGTTGACTGCTGAAAATGAAAAGCTCAAGGATTTGGTAAGTTCACTGGAGAAGAAGATTGATGAGACACAGAGAAAATATGAAGAAACAAACAAGATCAGTGAAGAGCGCTTGAAACAGGCTTTGGATGCAGAGTCAAAAATAATTCAGTTGAAAACTGATATGCAAAGACTTGAAGAAAAACTTTCTGACATGGAAACTGAGGACCAAATTCTGCGTCAGCAAGTATCGTTGCATTCTCCTGTTGGAAAAATGTCGGAACATTTAGCAATAGCATCTGAGCCGCACTTGGAAAATGGTCATCATGGGACTGAAGAAAAAAAGACCAGTGAGCCTGAGAGTGCAACACCTGTGAAAAAGTTTGGTACAGAGTCTGATAACAAGTTGAGGAAATCCCAGATTGAAAGGCAGCATGAGAGTGTTGATTCTCTTATCAAATGCGTGTCACAAGATCTTGGGTTTAGTAATGGAAAACCAGTTGCAGCAGTTACTATATACAAATGTCTTCTGCACTGGAAATCATTTGAAGCTGAAAAAACAAGCGTATTTGACCGTCTTATTCAGATGATTGGTTCTGCATTTGAGAACCAGGATAACAATGAACATATGGCTTATTGGCTATCCAATACATCTACACTACTATTATTGCTTCAACGGAGTCTCAGAACTACTGGTGCAGCAAGTCTACAACAGAAACCTCCCCCTGCACCATCATTATTTGGGAGGATGGCTCAAGGGTTCCGCTCATCCTTTTCTTCTGCAAATGTTTCGGTAGATGTAGTGCGTCAGGTTGAGGCTAAGTATCCAGCTTTGCTTTTCAAGCAGCAACTCACAGCATATGTGGAGACGATATATGGAATTATTCGAGACAATTTGAAGAAGGATTTGTCATCTGTCCTTTCTTCTTGTATCCAGGAACCAGAAACATCTAGAGAATCTTCTGGGCAGTCGCCGGGCAATAGTCCTCTAGCTAGTCCATGGCAGAGTATCATTAAGAGTCTAAATGAACTTCTTAGTACACTGACAGAAAATTTTGTGTCTCCAGTCCTTGTTCAGAAGATCTTCTCTCAGATATTCTCTTATATCAATTCACAGCTCTTTAATAGCCTTCTGCTTCGTCGTGAATGCTGCACATTCAGAAATGGGGAATATGTCAAGTCTGGGTTAGCTGAATTAGAACTATGGTGTGGCCAAACAAAAGAAGAGTATGTAGGCTCATCCTGGGATGAACTTAAGCACATAAGGCAAGCCGTTGGATTCTTGGTCATTCACCAAAAATCCAGAATTTCCTATGATGATTTAACAAATGACCTCTGCCCGAGCCTAAGTGTTCAACAGCTTTATAGAATATGTACACTATACTGGGATGACAACTACAACACTCGAAGTGTCTCACCAGATGTCATTTCCAGCATGCGGGAACAAATGCCAGAGGACTCCAATGATACTGCCACAACTCATTTTTGTTGGGTGACAATTCCAGCATTCCTTTCTCAGTTGATGACATTTCTAGTGCTATTCATGAGAAGGATTTCTCAGATGTAA 5010 40.5 MQSVPVKVVVGSHVWVEDPEIAWIDGEVVEVNGEEIKIICTSGKTIVANPSDVYPKDTEAPPHGIDDMTKLAYLHEPGVLQNLRCRYDINEIYTYTGSILIAVNPFQRLPHLYDNHVMEQYKGAVFGELSPHPFAVADSAYRLMINDGVSQSILVSGESGAGKTESTKMLMQYLAYMGGRAAAEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVEKYKLGDPRTFHYLNQSNCYELDGVNDSKEYLATRRAMNVVGISSVEQDAIFRVVAAVLHLGNIEFAKGQEIDSSEPKDDKSRFHLRMAAELFMCDEKSLEDSLCKRVIVTRDETITKWLDPDSAAVSRDALAKIVYSRLFDWIVDKINNSIGQDPDSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDYVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFSQKLYQTFKSHKRFSKPKLSPTDFTIYHYAGDVTYQTEHFLDKNKDYVVAEHQSLLSASRCSFVADLFPPLPEESSKTSKFSSIGSRFKQQLQSLLETLSATEPHYVRCVKPNNLLKPSIFENNNVLQQLRCGGVLEAIRISCAGFPTRRTFVEFIARFGILAPDVLKGSCDEVTTSKRILEKVDLKGYQIGKTKVFLRAGQMAELDARRNEVLGRSASIIQRKVRSYLSRKSFVLLRQSAIQIQASCRVQVACHRYEKMRKEAACRTIQKDLRMYLARKAYNRFCSSALSIQTGMRAMGACNELRFRKQTKAAIIIKSRCRGYLAHLHYLRIKKAAISTQCAWRGKVARRELRKLKIAAKETGALQAAKTMLEKQVEELTCQLQLEKRMRNICFCCLSYFLPDPSAILEVGCVNRFLIYSLWVLIPIIIQERWINNLERKGTTIKQEIRSAKHDEIKDTNYSVLGSLYHKVVLKSSELYLSLPTKNNLLMTERTLESLSLDFSCLSALLLSVRVCQAFGHMLPEQCRKSSSLFSRRDVDFCLVYHKHYYVIYAEKLVKASLMFWDVSTLFQADIEEAKTQENAKLQNALQEMQVQFQETKEMLIKERENAKKADEKVPIIQEVPAIDHEMMNKLTAENEKLKDLVSSLEKKIDETQRKYEETNKISEERLKQALDAESKIIQLKTDMQRLEEKLSDMETEDQILRQQVSLHSPVGKMSEHLAIASEPHLENGHHGTEEKKTSEPESATPVKKFGTESDNKLRKSQIERQHESVDSLIKCVSQDLGFSNGKPVAAVTIYKCLLHWKSFEAEKTSVFDRLIQMIGSAFENQDNNEHMAYWLSNTSTLLLLLQRSLRTTGAASLQQKPPPAPSLFGRMAQGFRSSFSSANVSVDVVRQVEAKYPALLFKQQLTAYVETIYGIIRDNLKKDLSSVLSSCIQEPETSRESSGQSPGNSPLASPWQSIIKSLNELLSTLTENFVSPVLVQKIFSQIFSYINSQLFNSLLLRRECCTFRNGEYVKSGLAELELWCGQTKEEYVGSSWDELKHIRQAVGFLVIHQKSRISYDDLTNDLCPSLSVQQLYRICTLYWDDNYNTRSVSPDVISSMREQMPEDSNDTATTHFCWVTIPAFLSQLMTFLVLFMRRISQM* 1670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10177413 10289083 + Vvi5g811 Vvi5g811 786953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g811 1669 Coils Coil 1154 1230 - -
Vvi5g811 1669 SMART DIL_2 1508 1615 IPR002710 -
Vvi5g811 1669 ProSiteProfiles IQ motif profile. 832 861 IPR000048 GO:0005515
Vvi5g811 1669 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Vvi5g811 1669 Pfam IQ calmodulin-binding motif 787 804 IPR000048 GO:0005515
Vvi5g811 1669 Pfam IQ calmodulin-binding motif 857 876 IPR000048 GO:0005515
Vvi5g811 1669 Pfam IQ calmodulin-binding motif 833 852 IPR000048 GO:0005515
Vvi5g811 1669 SMART MYSc_2a 57 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 Coils Coil 1094 1139 - -
Vvi5g811 1669 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Vvi5g811 1669 PRINTS Myosin heavy chain signature 93 112 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 PRINTS Myosin heavy chain signature 150 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 PANTHER MYOSIN-7 7 1643 - -
Vvi5g811 1669 Gene3D - 736 785 - -
Vvi5g811 1669 Gene3D - 786 833 - -
Vvi5g811 1669 Gene3D - 834 883 - -
Vvi5g811 1669 Gene3D Kinesin motor domain 66 663 IPR036961 -
Vvi5g811 1669 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Vvi5g811 1669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 884 IPR027417 -
Vvi5g811 1669 Gene3D - 440 624 - -
Vvi5g811 1669 MobiDBLite consensus disorder prediction 1250 1287 - -
Vvi5g811 1669 Pfam Myosin N-terminal SH3-like domain 11 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 ProSiteProfiles Dilute domain profile. 1339 1633 IPR002710 -
Vvi5g811 1669 PANTHER MYOSIN 7 1643 - -
Vvi5g811 1669 Coils Coil 957 977 - -
Vvi5g811 1669 Pfam DIL domain 1509 1612 IPR002710 -
Vvi5g811 1669 ProSiteProfiles IQ motif profile. 738 765 IPR000048 GO:0005515
Vvi5g811 1669 ProSiteProfiles Myosin motor domain profile. 63 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 786 IPR027417 -
Vvi5g811 1669 ProSiteProfiles IQ motif profile. 759 787 IPR000048 GO:0005515
Vvi5g811 1669 CDD MyosinXI_CBD 1290 1643 IPR037975 GO:0007015
Vvi5g811 1669 MobiDBLite consensus disorder prediction 1250 1269 - -
Vvi5g811 1669 SMART iq_5 854 876 IPR000048 GO:0005515
Vvi5g811 1669 SMART iq_5 831 853 IPR000048 GO:0005515
Vvi5g811 1669 SMART iq_5 735 757 IPR000048 GO:0005515
Vvi5g811 1669 SMART iq_5 783 805 IPR000048 GO:0005515
Vvi5g811 1669 SMART iq_5 758 780 IPR000048 GO:0005515
Vvi5g811 1669 Pfam Myosin head (motor domain) 66 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vvi5g811 1669 Gene3D - 253 311 - -
Vvi5g811 1669 Coils Coil 892 912 - -
Vvi5g811 1669 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Vvi5g811 1669 Gene3D - 667 734 - -
Vvi5g811 1669 CDD MYSc_Myo11 77 721 IPR036018 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi5g811 Vvi7g669 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g811 K10357 - ath:AT1G04600 1878.22