Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g815 ATGATCCTTGAATACATTGAAGAAACATGGCCACAGAATCCACTACTGCCTCAAGGTGCTTACGAGAGAGCCATGGCTCGTTTTTGGATCAAATTTGGTGAAGAAAAGATGGCCACCATTTGTGCAGTCTTGAGAACTTCCGGAGCAGAACAAGAGAGGGCAACAAAAGAAGCGATGGAACTGCTGAAAATCTTAGAAGAGCAAGGTCTTGGGGACAAGAAGTTCTTTGGTGGGGATGCCATAGGACTGGCAGACATAGCGTTTGGTTGGCTTGCTTACTTATTTGGAGTCATAGAAGAAGTAGCAGGTGTTAAAGTGCTGGATGCAAACAGATTACCTCGACTGCATGCATGGATTGACAATCTTAAGGAAGTTCCTGTGATCAAAGAAAATCTGCCCGACCGCCAGAAACTGTTGGGACACCTGAAACGCAGAAGGGAGACTCACCTCGCACTTCCAAATTGTAATAACTAG 474 45.36 MILEYIEETWPQNPLLPQGAYERAMARFWIKFGEEKMATICAVLRTSGAEQERATKEAMELLKILEEQGLGDKKFFGGDAIGLADIAFGWLAYLFGVIEEVAGVKVLDANRLPRLHAWIDNLKEVPVIKENLPDRQKLLGHLKRRRETHLALPNCNN* 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10533651 10534725 + Vvi5g815 Vvi5g815 786957

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g815 157 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 19 150 IPR010987 -
Vvi5g815 157 SUPERFAMILY GST C-terminal domain-like 8 148 IPR036282 -
Vvi5g815 157 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 150 IPR045073 -
Vvi5g815 157 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 150 - -
Vvi5g815 157 Gene3D - 19 152 - -
Vvi5g815 157 CDD GST_C_Tau 20 145 IPR045074 GO:0004364|GO:0006749
Vvi5g815 157 Pfam Glutathione S-transferase, C-terminal domain 50 120 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g815 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - vvi:100852677 321.242
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g815 . . . . . . . . . . Cma06g01278 . . . Sed02g1457 . . Bhi01g00088 Tan10g0596 Cmetu06g2009 . Hepe05g1844 . Lcy11g1727 . . . . . . . . . . . Lsi05g01791 . . Cme06g00432 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa03g01147 Chy06g00411 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000433 1 5 2 3 1 5 3 5 5 4 2 4 4 7 7 4 4 1 5 4 3 3 3 5 6 6 2 5 5 6 120