Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g820 ATGGCAGGAGTGAAGCTATTAGGGTTTTGGGCAAGCTCTTTTGCTTACAGGGTGATATGGACCCTAAAACTCAAGGGCATAAACTATGAGTATATTGAGGAAGACCTTCGTAGCAAGAGCCAGTTGTTGTTACACCACAATCCAGTTCACAAGAAGGTTCCGGTGCTTCTTCATGGTGACAGAGCAGTAGCCGAGTCCCTTGTAATCCTCGAATACATTGAAGAAACATGGCCGGAGAATCCACTGCTGCCGACAGATGCTTATGAGAGAGCCATGGCTCGGTTTTGGATCAATTTTGGAGAATCAAAGAATGCCACTTTTTTTCAATTCTTTAAATCTGCTGCTGGGGAAGAGCAAGAGAAGGCCATAAAAGAAACAGTGGAAATACTGAAAATCATAGAAGAGCAAAGCCTTGGGGATAAGAAGTTTTTCGGAGGGGAAGCTATAGGACTGGTGGACATAGCATTTGGTTGGCTGGCTTACTGGTTTGAGGGCATAGAAGAAGCCGTAGGCACAAAATTGCTGAATTCCACCACGTTCCCTCGATTGCAAGCATGGATTCAGAATTTTAAGCAGGTTCCAGTGATCAAAGAAAATCTTCCTGATCGTCAGAAATTGTGGGCACACTCGAAACGCTTTAGGGAGAGTTTAATTCAATAA 660 43.94 MAGVKLLGFWASSFAYRVIWTLKLKGINYEYIEEDLRSKSQLLLHHNPVHKKVPVLLHGDRAVAESLVILEYIEETWPENPLLPTDAYERAMARFWINFGESKNATFFQFFKSAAGEEQEKAIKETVEILKIIEEQSLGDKKFFGGEAIGLVDIAFGWLAYWFEGIEEAVGTKLLNSTTFPRLQAWIQNFKQVPVIKENLPDRQKLWAHSKRFRESLIQ* 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10653000 10654241 - Vvi5g820 Vvi5g820 786962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g820 219 Pfam Glutathione S-transferase, C-terminal domain 108 191 IPR004046 -
Vvi5g820 219 CDD GST_N_Tau 4 77 - -
Vvi5g820 219 CDD GST_C_Tau 87 213 IPR045074 GO:0004364|GO:0006749
Vvi5g820 219 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 1 215 - -
Vvi5g820 219 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Vvi5g820 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 213 IPR010987 -
Vvi5g820 219 Gene3D Glutaredoxin 1 85 - -
Vvi5g820 219 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Vvi5g820 219 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Vvi5g820 219 Gene3D - 86 219 - -
Vvi5g820 219 SFLD Glutathione Transferase (cytosolic) 2 216 IPR040079 -
Vvi5g820 219 SUPERFAMILY Thioredoxin-like 4 102 IPR036249 -
Vvi5g820 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vvi5g820 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g820 K00799 - vvi:100244144 446.432