Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g921 ATGAAGCACTTCATGCAACCAAGAAACACGATCTTGAGGGAGACAGACTCCCAATCATCATCTTCCTCAGCATCATCCCCAAACCCTAATTCTGTCAAACAGAGATCGGCCTCTCGGAAGCAAAAATGGTCCAAAGAGAACGCTCCGCCCTCAGATCTGAATACAATGGCCGATCATTCTTCCCCTTCCCTCGCTGCAAAATCCCTGCCCCCCTCAGGAAAGATCAGAAGCCCTTTGCCGCCGCGGCCTCCCTCTTCAAATTCTAACCCTCTCAAAAGGAAGCTCAGCATGGACACCGTCCCCGAGAACGCCGTTCCTGGGGCCTCTGATTCCGGTGTCAGGGTAATAGTGCGAATGCGGCCACCAAACAAGGATGAGGAAGAAGGCGAAGTGATAGCTCAGAAAATGTCCGGTGATTCTTTGTCTATCCTTGGACAGACCTTCACATTTGATTCTGTTGCTGATGCAGAATCTACACAGGCAAATATTTTCCAGCTAGTAGGGTCTCCTCTAGTGGAAAACTGTCTATCTGGGTTCAACAGTTCAGTATTTGCATACGGACAGACTGGGAGTGGGAAGACATATACCATGTGGGGTCCAGCCAATGCCTTGTTGGATGAAAACCTTTCAAACAACAAACAAGGCCTAACACCACGTGTATTTGAGCGACTTTTTGCACGCATAAATGAGGAGCAAATTAAGCATGCTGACAAACAGCTGAAGTATCAATGTCGCTGTTCATTTCTTGAGATTTATAATGAACAAATCACTGATCTCTTGGATCCTAGTCAGAAAAACCTCCAGATAAGAGAAGATGTTAAATCTGGTGTCTATGTTGAAAATCTGACAGAGGAATGTGTTTGTACAATGAAAGATGTGACTCAGCTGCTGATCAAGGGATTGTCAAATAGGAGGACGGGTGCAACAAGCATTAATGCGGAGAGTTCCCGTTCTCATAGTGTTTTTACTTGCGTTGTTGAATCCCGTTGCAAGAGCACATCAGATGGCATAAGCAGCTTTAAAACAAGTAGAATAAATCTTGTTGATCTGGCTGGGTCTGAAAGACAGAAGCTAACAGGCGCAGCAGGAGATCGCCTGAAGGAAGCAGGAAATATCAATCGATCACTTTCACAACTTGGGAACTTGATAAACATTCTTGCAGAAGTTTCCCAAACAGGAAAGCAAAGGCATATTCCCTACAGAGACTCCAGATTGACATTCTTATTGCAGGAATCTCTCGGTGGAAATGCTAAGCTAGCAATGGTCTGTGCTATTTCTCCAGTGCAAAGCTGTAAGAGTGAAACTCTCAGTACACTGAGATTTGCACAGCGTGCAAAGGCAATCAAGAACAAGGCAGTTGTCAATGAAGTTATGCAGGATGATGTGAATTTTTTGCGAGGAGTGATACGACAGCTAAAGGATGAACTACTTCGAATGAAGGCAAATGGCAACCAGCCAACTGACTCAAATGGAAGTTATTCAACAGGGTGGAATGCTCGTAGGAGCTTAAATCTCCTGAAATTTAGCCTCAATCGTCCAACAACATTACCTCATGTAGATGATGACGGTGATGAGGAGATGGAAATTGATGAGGAAGCAGTTGAGAAGCTATGGGTTCAAGTGGGTTTGCAATCAGTAAATGGTGAAGAAAACAGCAAAATTGATGCGGGTAAAATAGAAAATGTTCAGTCAGACTCACAATTTATGGCCTCTGAAGAAGGAATCATTGGGGAGCCTCAATCAAACATGTCCCAAAATGAATGTATTAAAGAAGAAGCATCTGAGGATACAGATGTTAATATGGAGGAAGAAATATCTGAACAATCAGAGATAAATGAGGATGAAAGTCAGATCCATTTAATTGTTAAGGCTTCAAATGACTCTCCAAATGGTTTAATGGATGGGATTCCACCTTCTAACCTCAGCATAGTTCCATGTAATATATCCCCAGTTCTCAAGTCTCCAACTCTCAGTGTTTCACCTAGAGTCAGTAACAATAGCAGGAAAAGTCTTAGGACTTCATCAATGTTAACTGCATCCCAGAAGGATCTCAGGGATGAAAAACATTTGGCGGCTAGTCTCCATCGTGGCCTTGAAATTATTGATGTTCATCGCCAGAGTTCAGCTTTGAGGCGTTCATCATTCAGGTTTTCCTTTAAACCTGCAGATACTAAGCCTATTTTGCCAGTTGATAAAGTTGATGTGGGCGTGCAAACTCTTCCACAAGAAAATGAGGCTCCAGAAGAAGAATCAGAAGCAGTTTTATGTAGTAATTGCAAGAGTACAATCCCTCAGGTAGAGCTTAAAGAGGCCTTTGAAAGTTCAAACCTACAGTTAGTACCTGTTGATGGGTCACAGTCTGCTGACAAATCAAAGAAGCAAGTTCCTAAAGCAGTGGAAAAAGTCTTGGCTGGAGCCATTAGGAGAGAAATGGCACTGGAAGAGTTCTGCACAAAGCAAACTTCTGAAATAATGCAACTTAATCGTTTGATTCAGCAATACAAGCATGAGAGAGAATGCAACTCCATAATTGGCCAAACACGAGAGGATAAAATTATTCGTCTTGAGAGCCTTATGGATGGTGTTTTACCAACTGAAGAGTTCATTGAGGAAGAATTAGTATCCCTCACACATGAGCATAAGCTTCTGAAGGAGAAATATGAGAACCATCCTGAAGTTTTAAGGACAAAACTTGAGTTAAAGCGAGTTCAAGACGAGCTAGAACGGTACCGGAACTTCTTTGATATGGGTGAGAGGGATGTGTTGTTGGAAGAAATTCAAGATTTGAGAAGCCACCTACAATATTATATTGATTCCTCACCCATGCCTCCCCGAAAACGAAGTCCTCTTCTACAGTTGACCTATTCATGTCAACCCAGTTTAACTCCACCTTTGTTCACAATTTCGGAGTCAACTGGGGAAAGTGCTGAGGAGAAACTTGAGCAGGAGAGATTACGTTGGACTGAGACAGAGAGCAAGTGGATTTCTCTCTCTGAAGAACTGAGAGATGAACTTGAAGCTAGCCGATCTCTTGCTGAAAAGCAGAAGGTAGAACTGGACTCTGAGAAGAAATGTGCAGAAGAGCTCAAGGAAGCAATGCAGCTTGCCATGGAGGGCCATGCACGTATGCTTGAACAGTATGCAGAACTTGAGGAGAGACATATGGCATTGCTTGCAAGGCATAGGAAGATTCAGGAAGGAATAGATGATGTCAAGAAAGCAGCTGCTAAAGCAGGAGTCAAGGGTGCTGAATCTAAGTTCATAAATGCCCTCGCTGCAGAAATTTCAGCACTGAAAGTGGAAAGAGAGAAAGAGAGACGGTATCTTAGGGATGAAAATAGAGGCCTTCAGGCTCAACTGAGAGATACTGCTGAAGCTGTACAGGCTGCTGGGGAATTACTTGTGCGACTTAAAGAAGCAGAAGAAGCTGTTGCTACTGCTCAGAAGCAAGCCATGGAAGCAGAACAAGAAACTGAGAAGGCTTACAAACAGATAGAGAAATTGAAGAAAAAACATGAAAAGGAGATCAGCACGCTGAATCAGTTCCTTGCAGAATCTCGTTTACCTAAAAAAGCACTAACACCGACTTATGATGATTCTGAAATGGCTAAATATGATGCAGGGGAATCCCATACAGCATGTGATCAGCAATGGAGAGAGGAGTTTGAGCCATTCTATAATGGTGAAGACAGCGAGTTGTCAAAACTCGCAGAACCATCTTCATGGTTCTCAGGGTACGACAGATGCAACATATAG 3756 43.16 MKHFMQPRNTILRETDSQSSSSSASSPNPNSVKQRSASRKQKWSKENAPPSDLNTMADHSSPSLAAKSLPPSGKIRSPLPPRPPSSNSNPLKRKLSMDTVPENAVPGASDSGVRVIVRMRPPNKDEEEGEVIAQKMSGDSLSILGQTFTFDSVADAESTQANIFQLVGSPLVENCLSGFNSSVFAYGQTGSGKTYTMWGPANALLDENLSNNKQGLTPRVFERLFARINEEQIKHADKQLKYQCRCSFLEIYNEQITDLLDPSQKNLQIREDVKSGVYVENLTEECVCTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSTSDGISSFKTSRINLVDLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMVCAISPVQSCKSETLSTLRFAQRAKAIKNKAVVNEVMQDDVNFLRGVIRQLKDELLRMKANGNQPTDSNGSYSTGWNARRSLNLLKFSLNRPTTLPHVDDDGDEEMEIDEEAVEKLWVQVGLQSVNGEENSKIDAGKIENVQSDSQFMASEEGIIGEPQSNMSQNECIKEEASEDTDVNMEEEISEQSEINEDESQIHLIVKASNDSPNGLMDGIPPSNLSIVPCNISPVLKSPTLSVSPRVSNNSRKSLRTSSMLTASQKDLRDEKHLAASLHRGLEIIDVHRQSSALRRSSFRFSFKPADTKPILPVDKVDVGVQTLPQENEAPEEESEAVLCSNCKSTIPQVELKEAFESSNLQLVPVDGSQSADKSKKQVPKAVEKVLAGAIRREMALEEFCTKQTSEIMQLNRLIQQYKHERECNSIIGQTREDKIIRLESLMDGVLPTEEFIEEELVSLTHEHKLLKEKYENHPEVLRTKLELKRVQDELERYRNFFDMGERDVLLEEIQDLRSHLQYYIDSSPMPPRKRSPLLQLTYSCQPSLTPPLFTISESTGESAEEKLEQERLRWTETESKWISLSEELRDELEASRSLAEKQKVELDSEKKCAEELKEAMQLAMEGHARMLEQYAELEERHMALLARHRKIQEGIDDVKKAAAKAGVKGAESKFINALAAEISALKVEREKERRYLRDENRGLQAQLRDTAEAVQAAGELLVRLKEAEEAVATAQKQAMEAEQETEKAYKQIEKLKKKHEKEISTLNQFLAESRLPKKALTPTYDDSEMAKYDAGESHTACDQQWREEFEPFYNGEDSELSKLAEPSSWFSGYDRCNI* 1252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15022474 15032692 - Vvi5g921 Vvi5g921 787063

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g921 1251 Coils Coil 817 837 - -
Vvi5g921 1251 Pfam Kinesin motor domain 144 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g921 1251 MobiDBLite consensus disorder prediction 1 94 - -
Vvi5g921 1251 Coils Coil 998 1060 - -
Vvi5g921 1251 MobiDBLite consensus disorder prediction 47 67 - -
Vvi5g921 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 459 IPR027417 -
Vvi5g921 1251 Coils Coil 866 886 - -
Vvi5g921 1251 SMART kinesin_4 110 456 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g921 1251 Gene3D Kinesin motor domain 106 480 IPR036961 -
Vvi5g921 1251 PRINTS Kinesin heavy chain signature 178 199 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g921 1251 PRINTS Kinesin heavy chain signature 309 326 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g921 1251 PRINTS Kinesin heavy chain signature 344 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g921 1251 PRINTS Kinesin heavy chain signature 398 419 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g921 1251 ProSitePatterns Kinesin motor domain signature. 343 354 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi5g921 1251 PANTHER KINESIN-LIKE PROTEIN KIN-12B 77 607 - -
Vvi5g921 1251 PANTHER KINESIN-LIKE PROTEIN KIN-12B 688 1251 - -
Vvi5g921 1251 PANTHER KINESIN-LIKE PROTEIN KIN-12B 613 688 - -
Vvi5g921 1251 Coils Coil 1130 1185 - -
Vvi5g921 1251 MobiDBLite consensus disorder prediction 10 38 - -
Vvi5g921 1251 ProSiteProfiles Kinesin motor domain profile. 112 448 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi5g921 1251 Coils Coil 455 482 - -
Vvi5g921 1251 PANTHER CENTROMERE PROTEIN E 613 688 - -
Vvi5g921 1251 PANTHER CENTROMERE PROTEIN E 688 1251 - -
Vvi5g921 1251 PANTHER CENTROMERE PROTEIN E 77 607 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g921 K10400 KIF15; kinesin family member 15 - vvi:100264192 2243.77
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g921 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005762 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 1 1 1 1 2 1 1 38