Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi5g950 ATGTCAAAGAAGAAGCAATCAGAAGAAGAACTGCTGCAAACCCTAGGAGACTTCACTAGCAAAGAAAATTGGGATAAGTTCTTCACCATCAGAGGCTCTGACGACTCCTTCGAGTGGTATGCCGAGTGGCCTCAGCTCAAAGACCCTCTCCTCTCCCACCTCTCCTCAACTGCTCCTCCGTCTGACCCTGCCAGTGAACCACCTCAGCCTCCTCCTCCACCGTTGCAAATCCTAGTCCCTGGCTGCGGCAATTCTCGCCTCTCCGAGCACCTCTACGACGCTGGATTCCATGGGATTACAAATGTTGATTTCTCCAAAGTTGTCATCTCGGATATGCTGAGGCGCAATGTGAGGTCGCGGCCCGATATGCGGTGGCGCGTCATGGACATCACCAGCATGCAGTTCCCAGATGGGAGCTTTGATGCTATCCTTGATAAGGGGGGATTGGATGCTTTGATGGAGCCCGAGCTTGGACCAAAGCTGGGGAAGATGTATTTAACAGAGGTAAAGAGAGTATTGAAATCTGGGGGGAAATTTATAGGCCTTACCTTGGCAGAATCTCACGTTCTAGGTTTGCTTTTCTCTAAGTTCCGATTTGGGTGGAAAATGAGTATTCATGTTGTATCTCAGAAACCGTCTAATAAGCCAAGCCTTCTAACTTTTATGGTGGTGGCTGAGAAAGAGAGTTCTACTGTGTTACACCAGATTACTACATCATTTGCTCGTTCATCTCTTGATCTTAATGGGAATCAGGCTCGTGGACTCTATGAAGCAATTGAAAATGAGAATAGAATTCGTAGAGAATACTCAAATGGTTCTGATTTAATATACTCTCTTGAAGATTTGCAACTAGGAGCTAAAGGGGATCTATTTCAGACTCGGGCTCATGAATGGCTCTTTTCCTCAGAAGAAGGACAATGGATGGTGGTTGAAAGCTCAAAGGCAGCTCGTTTAATAATGGTTTTATTAGACACCAGCCACACTAATGCTAGCATGGACGATATTCAGAAGGATTTGTCTCCCCTAGTTAAGCGCTTGGCACCTGCAAACAATAACACTGGAGCTCAAATTCCCTTCATGATAGCAGGTGATGGGATCAAGCAACGGAAAATTGTGCACCAGGTCACATCTACCTTGACTGGACTAATAACTGTTGAAGACGTGGTCTACGAAAATGTTGATGGAAAAGTCAGCCACCTTGTGCCATCTAAAGCTTTGTTATTTCGCCGCCTTACTTTTCAACGAGCTGAGGGTTTGGTGCAGTCTGAAGCTTTGCTAACAAGGGAAGGAGGCACTCAGAAAATTGTTAGTGAAACAGAGAGAAAGAAAAGCATCTCCTCTTCCAAGTCTAGAAAAAAAGGAAACCAGAAAAAAATTGATTCTCTTGCAATTCATGGATCTAGCAACAACTTGAAGGTCTACCATAACTATTTGGCTAGTTCTTATCATATGGGAATCATTTCGGGCTTTATGTTAATTTCTTCTTATTTGGAAAGTGTGGCATCGACAGGAAGAACAGTTAAAGCAGTTGTTATTGGTCTTGGAGCAGGTTTACTTCCTATGTTTCTCCATGGGTGTATGCCTTTCTTAGACATTGAGGTGGTGGAGTTGGATCCTGTGATTTTAAATCTTGCTAGGAATTACTTCGGCTTTTGTGAAGACAAACATTTGAAGGTACATATTGCTGATGGAATCCAATTCGTCAGAGGGGTTGCTGCTGATGGAGTGAGTGGAAAGCATGTAAATAATGATGCTCAATGCGATGCAGAGTGCCCTTCTTCCAATGGAAGTTGCACTGCATCTCACGCAGAGCGCAAAGTAATTAGCAAGTTTGACATACTTATTATTGATGTTGACTCTTCAGACTCGAGTTCTGGGATGACATGCCCTGCTGCAGACTTTGTGGATGAGTCTTTTCTCTTAACTGTAAAGGACTCTCTTTCTGATCAAGGTCTCTTTGTTGTTAATTTGGTCTCAAGATCCCGAGCCATCAAGAATATGGTTGTCTCACGGATGAAAGCGGTCTTCAGCCACTTATTTTGCCTCCAGCTTGAGGAAGACGTTAATGAAGTTCTTTTTGCTCTTCGTACTGAGGATTGCATTAAGGAGGAGCAGTTCGGTGAAGCTGCAGTCGAACTGGAGAAGCTGTTATCCTGGGACAGAAATGATCTTCCTGAGAAATCTAAACCCCCAGAGATGAGCCAAATCATTAGAGATTCTACTGAGAAAATCAAGTGTTTGAAGTGA 2247 43.93 MSKKKQSEEELLQTLGDFTSKENWDKFFTIRGSDDSFEWYAEWPQLKDPLLSHLSSTAPPSDPASEPPQPPPPPLQILVPGCGNSRLSEHLYDAGFHGITNVDFSKVVISDMLRRNVRSRPDMRWRVMDITSMQFPDGSFDAILDKGGLDALMEPELGPKLGKMYLTEVKRVLKSGGKFIGLTLAESHVLGLLFSKFRFGWKMSIHVVSQKPSNKPSLLTFMVVAEKESSTVLHQITTSFARSSLDLNGNQARGLYEAIENENRIRREYSNGSDLIYSLEDLQLGAKGDLFQTRAHEWLFSSEEGQWMVVESSKAARLIMVLLDTSHTNASMDDIQKDLSPLVKRLAPANNNTGAQIPFMIAGDGIKQRKIVHQVTSTLTGLITVEDVVYENVDGKVSHLVPSKALLFRRLTFQRAEGLVQSEALLTREGGTQKIVSETERKKSISSSKSRKKGNQKKIDSLAIHGSSNNLKVYHNYLASSYHMGIISGFMLISSYLESVASTGRTVKAVVIGLGAGLLPMFLHGCMPFLDIEVVELDPVILNLARNYFGFCEDKHLKVHIADGIQFVRGVAADGVSGKHVNNDAQCDAECPSSNGSCTASHAERKVISKFDILIIDVDSSDSSSGMTCPAADFVDESFLLTVKDSLSDQGLFVVNLVSRSRAIKNMVVSRMKAVFSHLFCLQLEEDVNEVLFALRTEDCIKEEQFGEAAVELEKLLSWDRNDLPEKSKPPEMSQIIRDSTEKIKCLK* 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15891381 15916025 - Vvi5g950 Vvi5g950 787092

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi5g950 748 MobiDBLite consensus disorder prediction 436 457 - -
Vvi5g950 748 MobiDBLite consensus disorder prediction 51 74 - -
Vvi5g950 748 Pfam Methyltransferase domain 79 180 IPR013216 GO:0008168
Vvi5g950 748 PANTHER EEF1A LYSINE AND N-TERMINAL METHYLTRANSFERASE 76 710 - -
Vvi5g950 748 PANTHER EEF1A LYSINE AND N-TERMINAL METHYLTRANSFERASE 16 50 - -
Vvi5g950 748 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 76 710 - -
Vvi5g950 748 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 16 50 - -
Vvi5g950 748 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 487 699 IPR029063 -
Vvi5g950 748 Gene3D Vaccinia Virus protein VP39 449 718 IPR029063 -
Vvi5g950 748 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 19 185 IPR029063 -
Vvi5g950 748 CDD AdoMet_MTases 77 180 - -
Vvi5g950 748 Gene3D Vaccinia Virus protein VP39 16 240 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi5g950 K25166 EEF1AKNMT, METTL13; eEF1A lysine and N-terminal methyltransferase [EC:2.1.1.-] - vvi:100258907 1368.6
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g950 . . Bda03g01134 . Bpe04g01077 . . . . . . . . . Sed02g1516 Cpe08g00405 . Bhi01g00216 Tan10g0506 Cmetu06g0645 Lac12g2024 Hepe05g1769 . Lcy11g1784 . . . . . . . . Cone15ag0259 . . Lsi05g01851 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010449 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 2 32