Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1067 ATGAGTAACATTGAAGGGTCCCCAGGAAGCTCCATGCATGGAGTCACAGGCCGAGAACAAACCTTTGCCTTTTCAGTGGCTTCCCCAATCGTCCCAACTGACACCTCTGCTAACTTTGCTTTACCGGTCGATTCTGAGCATAAGGCCAAGGTTTTCAAGATCCTTTCCTTTGCCAATCCTCATATGAGAACCTTTCACCTCTCTTGGATCTCCTTCTTCACTTGTTTTGTTTCCACTTTTGCCGCTGCTCCTCTTGTCCCCATCATACGCGACAACCTCAACCTTACGAAAGGAGACGTTGGAAATGCTGGAGTGGCTTCTGTTTCAGGAAGCATTTTCTCCAGGCTAGTAATGGGTGCAGTTTGTGACCTGTTGGGGCCACGGTATGGGTGTGCTTTCCTTGTCATGCTATCCGCCCCAACCGTCTTCTGCATGTCCTTTGTGTCATCAGCAGGAGGCTACATAGCTGTTCGGTTCATGATCGGATTCTCCCTGGCCACCTTTGTGTCTTGCCAGTACTGGATGAGCACCATGTTTAATGGTAAGATCATTGGTCTTGTCAATGGAACGGCCGCTGGGTGGGGAAACATGGGTGGTGGAGCAACTCAGCTCATAATGCCAATTCTGTATGAGGTAATCTGCAGAGTTGGTTCCACTCCATTTACTGCCTGGAGGATTGCATTCTTCATTCCAGGGTGGCTTCATGTGATCATGGGGATCTTAGTCTTAACTCTTGGCCAAGACCTACCTGATGGGAACCTCAGCACCCTGCAGAAAAAGGGAGATGTGTCCAGAGATAAGTTCTCTAGGGTTTTCTGGTATGCCATCACGAACTATAGAACATGGATCTTTGTCCTGCTCTATGGCTACTCCATGGGTGTAGAGTTGTCCATTGATAACGTAATTGCAGAATATTTCTATGATAGGTTCAATCTCAAGCTACACACTGCCGGAATCATTGCCGCCACCTTTGGCATGGCCAACCTCGTGGCCCGCCCCTTTGGTGGATACAGTTCAGACTTAGCAGGCCGAAGATTCGGCATGAGGGGCAGGCTATGGACCCTTTGGATCCTCCAAACTCTTGGAGGGGTATTCTGTATCTGGCTCGGCCGTGCCAATTCACTTTCCATTGCAGTCTTGGCCATGATGCTCTTCTCCGTTGGAGCTCAGGCCGCATGTGGAGCAACTTTTGGCATTGTTCCTTTCATTTCTCGACGATCTTTGGGCATAATATCTGGCCTAACCGGCCTCTCCTTAATGGGGGCCATGATTGTCGCTTGCACTCTTCCCGTGACATTGGTGCACTTCCCACAGTGGGGAAGCATGTTCCTCCCACCTTCAAAGGACGTGGTAAAAGGTACTGAAGAACACTATTACGAGTCCGAGTGGAATGAGGAGGAGAAGCAGAAGGGTATGCACCAGGGAAGTCTCAAGTTCGCGGAGAACAGCCGGTCAGAGCGTGGCCAACGCGTTGCCTCAGCACCAACCCCTCCCAACTCTACACCATCCCATAGGATTCTGTGTTCTTTGGTCGTGAAGACTAGATTCAGATTTCAGATTTCAGATGGGGATGAATGCGTAAATGGTATGCATATTCCGAGGGATTCTACCATATATATATATTAA 1626 49.26 MSNIEGSPGSSMHGVTGREQTFAFSVASPIVPTDTSANFALPVDSEHKAKVFKILSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKGDVGNAGVASVSGSIFSRLVMGAVCDLLGPRYGCAFLVMLSAPTVFCMSFVSSAGGYIAVRFMIGFSLATFVSCQYWMSTMFNGKIIGLVNGTAAGWGNMGGGATQLIMPILYEVICRVGSTPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLSTLQKKGDVSRDKFSRVFWYAITNYRTWIFVLLYGYSMGVELSIDNVIAEYFYDRFNLKLHTAGIIAATFGMANLVARPFGGYSSDLAGRRFGMRGRLWTLWILQTLGGVFCIWLGRANSLSIAVLAMMLFSVGAQAACGATFGIVPFISRRSLGIISGLTGLSLMGAMIVACTLPVTLVHFPQWGSMFLPPSKDVVKGTEEHYYESEWNEEEKQKGMHQGSLKFAENSRSERGQRVASAPTPPNSTPSHRILCSLVVKTRFRFQISDGDECVNGMHIPRDSTIYIY* 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17713454 17715662 + Vvi6g1067 Vvi6g1067 788644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1067 541 ProSitePatterns Sugar transport proteins signature 1. 335 350 IPR005829 GO:0016021|GO:0022857|GO:0055085
Vvi6g1067 541 Gene3D MFS general substrate transporter like domains 57 254 IPR036259 -
Vvi6g1067 541 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 416 IPR044772 GO:0015112
Vvi6g1067 541 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 415 501 IPR044772 GO:0015112
Vvi6g1067 541 MobiDBLite consensus disorder prediction 476 502 - -
Vvi6g1067 541 SUPERFAMILY MFS general substrate transporter 59 444 IPR036259 -
Vvi6g1067 541 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 1 416 - -
Vvi6g1067 541 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.1-LIKE 415 501 - -
Vvi6g1067 541 Pfam Major Facilitator Superfamily 69 418 IPR011701 GO:0022857|GO:0055085
Vvi6g1067 541 Gene3D MFS general substrate transporter like domains 268 444 IPR036259 -
Vvi6g1067 541 MobiDBLite consensus disorder prediction 462 502 - -
Vvi6g1067 541 CDD MFS_NRT2_like 65 433 IPR044772 GO:0015112
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g1067 Vvi8g538 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1067 K02575 - vvi:100241340 974.541