Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1079 ATGGCTTCCTGCTCTATTGCCACTTCTCTATCGCGCCTCTCTCTCCTCCGTCTAATCCCCAAACCCTCTTCTTCTTATTCTTCTTCAATTCCTCTTTTTCCTACCACTACTCGGAAGGATCCGAGTAGGTTTCGGTTGTTTTCGGCGTCAATGGCTTCTGAACCCAAGGAATCTCCCTCTAACAATCCGGGCCTCCATTCCAGCCCTGATGAGGCCACTAAAGGATACTTCATGCAACAGACTATGTATCGGATTAAGGACCCTAAAGTCAGTCTCGATTTCTATTCTCGCGTATTGGGAATGTCGCTACTTAAACGGTTGGATTTTCCAGAGATGAAGTTTAGCCTGTACTTTATGGGGTATGAGGATACAGCATCAGCTCCCAGTAATGAAACTGAAAGAATCGTCTGGACCTTTAGTCAAAAGGCTACTATTGAGCTCACACACAACTGGGGTACTGAGAGTGATCCTGACTTCAAAGGTTACCACAATGGGAACTCAGAACCTCGTGGATTTGGACACATAGGCATCACAGTCGATGACACATACAAGGCATGCGAAAGATTTGAACGTCTAGGGGTTGAGTTTGTAAAAAAACCAGATGATGGTAAAATGAAAGGGTTAGCATTCATTAAGGATCCTGATGGCTATTGGATTGAAATCTTTGACCTTAGAAGAATTGGAACTGTGAGTACCACTGCTGCTTGA 708 44.49 MASCSIATSLSRLSLLRLIPKPSSSYSSSIPLFPTTTRKDPSRFRLFSASMASEPKESPSNNPGLHSSPDEATKGYFMQQTMYRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPSNETERIVWTFSQKATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLRRIGTVSTTAA* 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17922334 17929648 + Vvi6g1079 Vvi6g1079 788656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1079 235 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 80 221 IPR004360 -
Vvi6g1079 235 MobiDBLite consensus disorder prediction 51 71 - -
Vvi6g1079 235 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 77 224 IPR037523 -
Vvi6g1079 235 ProSitePatterns Glyoxalase I signature 2. 165 181 IPR018146 GO:0004462|GO:0046872
Vvi6g1079 235 CDD GlxI_Zn 78 222 - -
Vvi6g1079 235 Gene3D - 47 227 IPR029068 -
Vvi6g1079 235 MobiDBLite consensus disorder prediction 53 68 - -
Vvi6g1079 235 PANTHER LACTOYLGLUTATHIONE LYASE 41 230 - -
Vvi6g1079 235 TIGRFAM glyox_I: lactoylglutathione lyase 66 228 IPR004361 GO:0004462|GO:0046872
Vvi6g1079 235 ProSitePatterns Glyoxalase I signature 1. 80 101 IPR018146 GO:0004462|GO:0046872
Vvi6g1079 235 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 41 230 - -
Vvi6g1079 235 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 68 223 IPR029068 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1079 K01759 - vvi:100244888 457.603