Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1113 ATGGGTCAGATCCAGTACTCTGAGAAGTACTTTGATGACACCTACGAGTACAGGCATGTGGTTCTTCCTCCTGAAGTGGCCAAACTGCTCCAGAAGAATCGGCTTCTCTCGGAAAATGAATGGCGTGCTATTGGGGTTCAGCAGAGCCGTGGGTGGGTCCACTATGCAATTCATCGCCCTGAGCCACACATCATGCTCTTCAGGAGGCCTCTGAACTATCAGCAGCAGCAGGAGAATCAAGCTCAGCAGGGCTTGCTTGCTAAGTGA 267 51.69 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLQKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQGLLAK* 89
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18333290 18334809 - Vvi6g1113 Vvi6g1113 788690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1113 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 83 - -
Vvi6g1113 88 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Vvi6g1113 88 SMART CKS_2 3 72 IPR000789 GO:0016538
Vvi6g1113 88 Gene3D - 1 83 IPR036858 GO:0016538
Vvi6g1113 88 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Vvi6g1113 88 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Vvi6g1113 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Vvi6g1113 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Vvi6g1113 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Vvi6g1113 88 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Vvi6g1113 88 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 83 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1113 K02219 - vvi:100261930 179.489