Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi6g113 | ATGAAAATGTGTTCTCAGGTAGTAGGGCTGCTCATCCTTGGTGTGTTTCTGCTTGGGGGATCACCTTCCTATGGTCAGCTGAGCCCAACGTATTATGACGATACGTGCCCAAATGCATCAAGTATTGTACGTGGGGTAATCCAGGAGGCTTTTATTTCGGATGTTAGGATAGGCGCCAGCCTCATTAGGCTTCATTTCCATGACTGCTTCGTCAATGGTTGTGATGGCTCGCTTTTGCTGGACAACACGGAAACCATAGTAAGCGAGAAAGATGCAATTCCAAATGCAAACTCAACGAGGGGCTTTGAGGTTGTTGACAGCATCAAGACCGCGCTGGAGAGCTCTTGCCAAGGCATCGTCTCCTGTGCTGATATTCTCGCCATTGCAGCTGAGGCATCAGTTAATATGTCAGGAGGTCCGTCGTGGACAGTTCTACTAGGAAGAAGGGATAGCAGAATATTGGCCTTAACACTACCACTGATTTGGTTGCACTATCTGGTGCTCACACATTTGGAAGGGCTGCATGCCGATTTTTCAGCGATCGTATATACAATTTCAGTGGCACAGAAAGTCCTGACCCGTCGCTGA | 588 | 48.13 | MKMCSQVVGLLILGVFLLGGSPSYGQLSPTYYDDTCPNASSIVRGVIQEAFISDVRIGASLIRLHFHDCFVNGCDGSLLLDNTETIVSEKDAIPNANSTRGFEVVDSIKTALESSCQGIVSCADILAIAAEASVNMSGGPSWTVLLGRRDSRILALTLPLIWLHYLVLTHLEGLHADFSAIVYTISVAQKVLTRR* | 196 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 1261665 | 1263343 | - | Vvi6g113 | Vvi6g113 | 787690 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi6g113 | 195 | Pfam | Peroxidase | 43 | 152 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | ProSitePatterns | Peroxidases active site signature. | 58 | 69 | IPR019794 | GO:0004601 | |
Vvi6g113 | 195 | PANTHER | PEROXIDASE 22-RELATED | 10 | 160 | - | - | |
Vvi6g113 | 195 | PANTHER | PEROXIDASE 72-RELATED | 10 | 160 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | SUPERFAMILY | Heme-dependent peroxidases | 26 | 154 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | Gene3D | - | 27 | 168 | - | - | |
Vvi6g113 | 195 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi6g113 | 195 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi6g113 | K00430 | - | vvi:100260291 | 296.975 |