Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g113 ATGAAAATGTGTTCTCAGGTAGTAGGGCTGCTCATCCTTGGTGTGTTTCTGCTTGGGGGATCACCTTCCTATGGTCAGCTGAGCCCAACGTATTATGACGATACGTGCCCAAATGCATCAAGTATTGTACGTGGGGTAATCCAGGAGGCTTTTATTTCGGATGTTAGGATAGGCGCCAGCCTCATTAGGCTTCATTTCCATGACTGCTTCGTCAATGGTTGTGATGGCTCGCTTTTGCTGGACAACACGGAAACCATAGTAAGCGAGAAAGATGCAATTCCAAATGCAAACTCAACGAGGGGCTTTGAGGTTGTTGACAGCATCAAGACCGCGCTGGAGAGCTCTTGCCAAGGCATCGTCTCCTGTGCTGATATTCTCGCCATTGCAGCTGAGGCATCAGTTAATATGTCAGGAGGTCCGTCGTGGACAGTTCTACTAGGAAGAAGGGATAGCAGAATATTGGCCTTAACACTACCACTGATTTGGTTGCACTATCTGGTGCTCACACATTTGGAAGGGCTGCATGCCGATTTTTCAGCGATCGTATATACAATTTCAGTGGCACAGAAAGTCCTGACCCGTCGCTGA 588 48.13 MKMCSQVVGLLILGVFLLGGSPSYGQLSPTYYDDTCPNASSIVRGVIQEAFISDVRIGASLIRLHFHDCFVNGCDGSLLLDNTETIVSEKDAIPNANSTRGFEVVDSIKTALESSCQGIVSCADILAIAAEASVNMSGGPSWTVLLGRRDSRILALTLPLIWLHYLVLTHLEGLHADFSAIVYTISVAQKVLTRR* 196
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
6 1261665 1263343 - Vvi6g113 Vvi6g113 787690
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g113 195 Pfam Peroxidase 43 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vvi6g113 195 PANTHER PEROXIDASE 22-RELATED 10 160 - -
Vvi6g113 195 PANTHER PEROXIDASE 72-RELATED 10 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 ProSiteProfiles Plant heme peroxidase family profile. 26 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 SUPERFAMILY Heme-dependent peroxidases 26 154 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 Gene3D - 27 168 - -
Vvi6g113 195 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g113 195 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Vvi6g113 Vvi8g1279 ECH
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g113 K00430 - vvi:100260291 296.975