Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1134 ATGAAATTTCAAATATGCTTAAAAAAGAATTTAGGTGGATGTGATATTAGTATTAATGTTTTGAAGTTCCCACTTGGCTGGAGGTTTGGAACTCAGAGTCTCACATCACGAGCCTCCTGCCCAGAGATGCCACTCGCTCCATCCTCTTCTCCGCATCTTCTTCAATTCCCTGTCTCCTCACCTGCTCACCGCCTCCTCCTCTTCTCTGACCTCACCTGCGCCACATTCTTTCGCTCCTCATGGCCACCGCCATTTCCGATCTCCTTGAAGAAGGCCAATTCCTTCGTGTTTCCGATCTCCGTCCGGAGGGAGAAATGCTTCTCCAAATCAACCGAGGAGGATCTCCTGAGCGATTCGGAAACCCAAACAGGCGGAAACGACGACCGCCCGGCCTCTGTGGCTACCACTGGTGGTTCGCAGAGGATCGCGGCGTCGTCCACTGATTCTCTCTCTCTTGGAATTCGTGAGCCGGTCTATGAGGTGGTAGAGGTGAAGTCGGATGGGAAGGTGTCGACTAGGAAAATCAACCGAAGACAGTTGTTGAAGTCAAGCGGACTTCGTCCTAGAGATATACGGAGCGTGGATCCATCACTGTGGTTGACAAACTCAATGCCTTCTTTGGTGGTCCGCGAGCATGCTATACTATTAAATTTGGGATCATTGCGAGCAATAGCAATGCAAGAGAGTGTCTTTATATTTGACTATAATCGTAAAGGAGGGAAAGCTTTCATGGATTCGTTGTTGCCTCGCTTGAACCCTAAAAACATGAACGGTGGACCATCAATGCCATTTGAGCTTGAGGTCGTTGAAGCAGCCTTGCTTTCAAGGATACAGCGTTTGGAGCAGAAACTGATGGATCTAGAACCTCGTGTCCAAGCTCTGCTTGAGGTTTTACCAAACCGATTAACTGCTGACATATTGGAGCAACTTCGCCTTAGCAAGCAAACTTTGGTTGAATTAGGTTCAAGGGCTGGAGCTCTCAAACAAATGTTGCTTGATCTTCTAGAGGACCCCCATGAAATACGCCGTATGTGTATCATGGGAAAAAACTGCACACTTGTGAAAGGGAATGAAAACATGGAATGCTCTGTTCCTCTAGAAAAACAGATTGCTGAAGAAGAGGAGGAAGAAATTGAAATGCTTTTGGAAAACTATCTTCAAAGATGTGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTTGATTCTGCCAGAGAAATGGAAGATTCAATTGCTGTTAATTTAAGCTCTCGGAGGCTTGAGGTAAGCAGAGTGGAATTGCTTCTTCAGGTAGGGACATTTTGTATAGCAGTTGGCGCACTGGTTGCAGGAATATTTGGCATGAACTTGAAGTCCTATCTAGAAGAACATGCGTTTGCCTTTTGGCTAACAACAGCTGGGATAATTGTTGGTGCTGTTGTGGCATTTTTTCTTATGTACTCGTATCTTAGGGCAAGGAAGATATTATAA 1467 45.88 MKFQICLKKNLGGCDISINVLKFPLGWRFGTQSLTSRASCPEMPLAPSSSPHLLQFPVSSPAHRLLLFSDLTCATFFRSSWPPPFPISLKKANSFVFPISVRREKCFSKSTEEDLLSDSETQTGGNDDRPASVATTGGSQRIAASSTDSLSLGIREPVYEVVEVKSDGKVSTRKINRRQLLKSSGLRPRDIRSVDPSLWLTNSMPSLVVREHAILLNLGSLRAIAMQESVFIFDYNRKGGKAFMDSLLPRLNPKNMNGGPSMPFELEVVEAALLSRIQRLEQKLMDLEPRVQALLEVLPNRLTADILEQLRLSKQTLVELGSRAGALKQMLLDLLEDPHEIRRMCIMGKNCTLVKGNENMECSVPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVNLSSRRLEVSRVELLLQVGTFCIAVGALVAGIFGMNLKSYLEEHAFAFWLTTAGIIVGAVVAFFLMYSYLRARKIL* 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18721342 18742290 - Vvi6g1134 Vvi6g1134 788711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1134 488 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 80 488 IPR039204 -
Vvi6g1134 488 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 424 479 IPR045863 -
Vvi6g1134 488 Pfam CorA-like Mg2+ transporter protein 370 477 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi6g1134 488 CDD Mrs2_Mfm1p-like 161 487 IPR039204 -
Vvi6g1134 488 MobiDBLite consensus disorder prediction 112 144 - -
Vvi6g1134 488 Gene3D Magnesium transport protein CorA, transmembrane region 236 419 - -
Vvi6g1134 488 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 80 488 - -
Vvi6g1134 488 MobiDBLite consensus disorder prediction 117 144 - -
Vvi6g1134 488 Gene3D - 154 235 - -
Vvi6g1134 488 Coils Coil 368 388 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1134 K16075 - vvi:100246455 786.949