Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g1139 ATGGCTTCAATTCTCCGATTTCGAAAGCTATGCTATGTGGAGCCCGTGAAGTGTTCGTCACTGGGTACTGTTGGGGAGAAGCAGAAGAAGAAAAGCAGCAAGAGGCAGCCAAGAGAATGGAGGTGTATGGATTACTGTTGCTTGACAGTTGGATACGTGTGCACTGCCTGGTGGCTTCTCTTGTTTCTGTACCACTGTTTGCCAGCTGCTCTGCCTGGCTTTCAGGTCCCGGAAGCCCCCGGTGCGCGGCTTAGGCGCGAGGGCTTAACCGCCCTTCACCCGGTTGTTTTGGTGCCCGGCATTGTCACCGGTGGCTTAGAGCTTTGGGAAGGTCGACCTTGTTCTGAGGGCCTATTCCGGAAGCGACTTTGGGGTGGCAGCTTCACTGAAATATTCAAGAGGCCTTTGTGCTGGTTAGAGCATCTGACCCTGCACAACCAAACAGGGCTTGACCCACCAGGCATTCGTGTCCGAGCAGTTCCAGGGCTGGTTGCGGCTGACTATTTTGCTCCTGGGTACTTTGTCTGGGCTGTACTTATCGAGAATTTGGCACGAATTGGTTATGAGGGGAAGAATTTGTATATGGCTGCTTATGATTGGAGACTCTCTTTCCAGAATACAGAGATCCGGGACCAAGCTCTTAGTAGGTTGAAGAGTAAAATTGAGCTTATGTTTGTAACCAATGGAAATAAGAAAGTGGTGGTGGTGCCTCATTCAATGGGAGTTATCTATTTCTTCCACTTCTTAAAATGGGTTGAATCCCCTCCTCCTATGGGAGGTGGTGGCGGAACGGGTTGGTGTGCCAAGCACATCAAAGCGATCATGAACATTGGCCCAGCATTTCTTGGTGTTCCAAAGGCTGTCAGTAATATATTCTCTGCCGAGGCCAAAGACGTTGCTTTTGTGAGATCCATGGATCCTGGTGTTCTAGATTCTGAGATTCTTGGGCTTCAGACCCTTGAGCATGTCATGCGGGTCTGCCGAACTTGGGATTCCATCATTTCCCTGATCCCAAAAGGAGGAGAGACCATCTGGGGAAACTTGGATTGGTCTCCAGAAGAAGGGTATAATTGCGATTTGGCCAAGAAAAGATATGCACAACCATCCTTACTTGACAGTAATGATACCAACAGTGATGGAAAGATGGAGTTTCAAATAAAAGAGTCTGTGAGGTATGGAAGGATAATCTCTTTTGGAAAAGCAACATCACAGTTACCTTCTTCCCAGCTCCCCAATCTTGGTTCCAAGGATTTTTTGCGCACAAGTAATCCCACGAAATTCAACTCATTATGCAGCGAGGTTTGGACTGAATATGATGAGATGAGCAGGGATGGCATCCGGAAAATTGCAGAAAACAAAGCTTACACAGCTAGAACTTTCCTTGATTTACTTCGCTTTGTAGCTCCGAAGATGATGCAACGTGCTGAGGCTCAGTTTTCTCATGGAATAGCTGATAATTTAGATGATCCTAAATATGCCCATTATAAGTACTGGTCCAATCCACTGGAGACCAAGTTGCCTGATGCCCCAGATATGGAAATTTACTGTTTATACGGTGTTGGACTTCCCACCGAAAGATCATATGTGTACAAGCTTTCACCAACTGATAGGTGCAAGAGCATTCCTTTTCGGATTGATAGCTCAGCAGAAGGAAGTGATGGTGGCTGCTTGAAGGGTGGGGTATATTTTGTAGATGGCGATGAGAGTGTTCCAGTGCTGAGTGCTGGGTTCATGTGTGCCAAAGGGTGGAAAGGAAGAACCCGGTTCAACCCATCTGGCATTGCTACATATGTAAGGGAGTACAGGCACAAGCCACCAGCATCTCTGTTTGAGGGGAGGGGAGTAGAGAGTGGAGCTCATGTTGACATCATGGGAAATGTTGCGTTGATTGAGGATGTATTGCGCGTTGCAGCTGGTGCCACCGGTGTAGAGATGGGAGGTGATAGGATTTATTCCGACATAATGAGAATGTCGGACAGAATAAATCTTCGGCTCAAGTTTCATTGCTCACAACAGCAGAAAGATATGGGGTTTCCAGGTTCTTTCTGGGCTTCATGGCTGCTTCTTGTTATGGTGGTGTCTGTGGCTAAAGGACAGCCTCTGGTTCCTGCAATGTTCATATTTGGGGACTCAGCTGTTGATGCTGGCAACAACAATCACCTCGACACCATCGTAAAAGCCAACTTCCCTCCTTATGGAAGAGATTTTATCTCTCACAAACCAACTGGAAGGTTCTGCAATGGAAAACTAGCCTCAGACTTCACTGCTGAGAACATAGGCTTCACTTCATACCCACCAGCTTATCTCAGCAAAGAAGCCAAAGGAAACAATCTCTTGATTGGTGCCAACTTTGCCTCAGCTGCTTCTGGTTACTACCACACCACAGCAAAGTTATCTAATGCTATCTCACTGAGTAAGCAGCTGGAGTACTTCAAGGAGTACCAGGAAAGAGTTGCGAAGATTGTAGGCAAGTCCAATGCGTCATCAATAATCTCTGGTGCGGTCTATCTCGTCAGTGGTGGGAGCAGTGATTTTCTTCAGAACTATTACATCAATCCTCTTCTCTATGAGGCCTATTCTCCTGATCAGTTCTCAGACCTTCTCATACGTTCCTATTCCATTTTCATTCAGGAACTATATGGGTTGGGAGCAAGGAAGATCGGAGTTACATCGCTGCCACCTCTAGGATGCGTGCCTGCAGCCATCACAATATTTGGCACTGACAGCAACGACTGCGTGGCCAAATTAAACAAAGATGCAGTTTCATTCAATAATAAGCTAAATGCCACTTCTCAAAGCTTGCTAAATAAGCTTTCAGGACTTAATCTCCTCGTTTTTGACATCTACCAGCCTCTCTACAACCTTGTCACCAAGCCTACTGATAATGGGTTCTTTGAGTCGAGGAAGGCTTGTTGTGGAACAGGGTTGCTAGAAACATCAATTCTGTGCAATGCCGAGTCGGTGGGAACATGTGCAAATGCAACAGAGTATGTATTCTGGGATGGATTTCATCCCACAGAGGCTGCTAACAAAATCTTGGCTGATAATCTCCTGGAAGATGGCATCTCCCTCATATTCTAA 3081 46.54 MASILRFRKLCYVEPVKCSSLGTVGEKQKKKSSKRQPREWRCMDYCCLTVGYVCTAWWLLLFLYHCLPAALPGFQVPEAPGARLRREGLTALHPVVLVPGIVTGGLELWEGRPCSEGLFRKRLWGGSFTEIFKRPLCWLEHLTLHNQTGLDPPGIRVRAVPGLVAADYFAPGYFVWAVLIENLARIGYEGKNLYMAAYDWRLSFQNTEIRDQALSRLKSKIELMFVTNGNKKVVVVPHSMGVIYFFHFLKWVESPPPMGGGGGTGWCAKHIKAIMNIGPAFLGVPKAVSNIFSAEAKDVAFVRSMDPGVLDSEILGLQTLEHVMRVCRTWDSIISLIPKGGETIWGNLDWSPEEGYNCDLAKKRYAQPSLLDSNDTNSDGKMEFQIKESVRYGRIISFGKATSQLPSSQLPNLGSKDFLRTSNPTKFNSLCSEVWTEYDEMSRDGIRKIAENKAYTARTFLDLLRFVAPKMMQRAEAQFSHGIADNLDDPKYAHYKYWSNPLETKLPDAPDMEIYCLYGVGLPTERSYVYKLSPTDRCKSIPFRIDSSAEGSDGGCLKGGVYFVDGDESVPVLSAGFMCAKGWKGRTRFNPSGIATYVREYRHKPPASLFEGRGVESGAHVDIMGNVALIEDVLRVAAGATGVEMGGDRIYSDIMRMSDRINLRLKFHCSQQQKDMGFPGSFWASWLLLVMVVSVAKGQPLVPAMFIFGDSAVDAGNNNHLDTIVKANFPPYGRDFISHKPTGRFCNGKLASDFTAENIGFTSYPPAYLSKEAKGNNLLIGANFASAASGYYHTTAKLSNAISLSKQLEYFKEYQERVAKIVGKSNASSIISGAVYLVSGGSSDFLQNYYINPLLYEAYSPDQFSDLLIRSYSIFIQELYGLGARKIGVTSLPPLGCVPAAITIFGTDSNDCVAKLNKDAVSFNNKLNATSQSLLNKLSGLNLLVFDIYQPLYNLVTKPTDNGFFESRKACCGTGLLETSILCNAESVGTCANATEYVFWDGFHPTEAANKILADNLLEDGISLIF* 1027
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 18799984 18808243 - Vvi6g1139 Vvi6g1139 788716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g1139 1026 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 23 729 - -
Vvi6g1139 1026 Gene3D alpha/beta hydrolase 143 321 IPR029058 -
Vvi6g1139 1026 Pfam Lecithin:cholesterol acyltransferase 119 625 IPR003386 GO:0006629|GO:0008374
Vvi6g1139 1026 CDD SGNH_plant_lipase_like 703 1018 IPR035669 -
Vvi6g1139 1026 Pfam GDSL-like Lipase/Acylhydrolase 706 1016 IPR001087 GO:0016788
Vvi6g1139 1026 Gene3D SGNH hydrolase 694 1021 IPR036514 -
Vvi6g1139 1026 SUPERFAMILY SGNH hydrolase 827 1018 - -
Vvi6g1139 1026 SUPERFAMILY alpha/beta-Hydrolases 93 370 IPR029058 -
Vvi6g1139 1026 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 2-RELATED 23 729 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g1139 Vvi8g1077 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g1139 K00679 - vvi:100243077 1341.25