Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g114 ATGTCTTCATCTCAGTTGCTAGCAGCAGCTCTCTTCTTAGCAGCTGTTCTTGGAGGTTCTAATGCTCAGCTCAGCGCGACGTTCTACGATACCTCGTGCCCAAATATATCTAGTATTGTGCAGGGTATCATTGAGCAGGCTCAGAACAGCGATGTTCGAATTAATGCCAAGCTGATTCGCCTCCATTTCCATGATTGTTTTGTCGATGGATGCGATGGATCGATTTTGCTGGACAATGCAGATGGTATAGCGAGCGAGAAAGACGCGAGCCCTAATATAAACTCAGTAGACGGATTCTCAGTAGTCGACGACATCAAAACCGCACTGGAGAATGTCTGCCCAGGCGTCGTCTCCTGCGCTGATATTCTGGCCATTGCATCCCAAATTTCGGTTTCCTTGGCAGGAGGTCCAACATGGCAGGTCTTATTCGGTAGAAGGGATAGTACGACAGCTTACCAAGCTGGGGCTAATAGCGATATCCCAACCCCACTTGAAACCCTTGAACAAATCACACAGAAGTTTACCAATAAGGGACTTGACTCCACTGATTTAGTCGCATTATCCGGTGCACATACATTTGGGCGCGCCCAATGCAGAACTTTCAGCCATCGCCTTTACGACTTTAACAACTCAAGCAGTCCTGATCCGACCATCGACGCAACATACCTGCAGACCCTTCAAGGAACGTGCCCTCAAGACGGAGATGGAACCGTTGTGGCGAATCTCGACCCCTCGACTCCAAATGGCTTTGACAATGACTACTTTACAAACCTTCAAAACAACCGAGGGCTTCTGCAGACTGATCAAGAGCTGTTTTCAACTACTGGGGCTGACACCATTGCCATTGTAAACCAGTTTGCCAGCAGCCAGAGTGAGTTCTTTGATGCCTTTGCTCATATAATAAACAATGCAAACAAACCTGACTTTGGCCTTCACGCGATTCATTGGACAACTAAACGTAATCGATTAAAGTTTCACTTTTCTTTAAGATTTGAATGA 999 46.75 MSSSQLLAAALFLAAVLGGSNAQLSATFYDTSCPNISSIVQGIIEQAQNSDVRINAKLIRLHFHDCFVDGCDGSILLDNADGIASEKDASPNINSVDGFSVVDDIKTALENVCPGVVSCADILAIASQISVSLAGGPTWQVLFGRRDSTTAYQAGANSDIPTPLETLEQITQKFTNKGLDSTDLVALSGAHTFGRAQCRTFSHRLYDFNNSSSPDPTIDATYLQTLQGTCPQDGDGTVVANLDPSTPNGFDNDYFTNLQNNRGLLQTDQELFSTTGADTIAIVNQFASSQSEFFDAFAHIINNANKPDFGLHAIHWTTKRNRLKFHFSLRFE* 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1263823 1274454 - Vvi6g114 Vvi6g114 787691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g114 332 PANTHER LIGNIN-FORMING ANIONIC PEROXIDASE 6 299 - -
Vvi6g114 332 PANTHER PEROXIDASE 72-RELATED 6 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 Pfam Peroxidase 43 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 CDD secretory_peroxidase 23 298 IPR033905 GO:0004601|GO:0042744
Vvi6g114 332 SUPERFAMILY Heme-dependent peroxidases 23 299 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vvi6g114 332 Gene3D - 28 160 - -
Vvi6g114 332 Gene3D Peroxidase, domain 2 161 299 - -
Vvi6g114 332 ProSiteProfiles Plant heme peroxidase family profile. 23 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g114 332 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g114 Vvi8g1279 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g114 K00430 - vvi:100265513 583.563