Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g115 ATGTCTCGAGTAGAGCATCTATGGGAGCGGTTGGTGCATGCAGCGCTAAGGAGTGAAAAGGCCGGGTTTGATGCATTTGGGCGGCCTGTTGGTGGCATTGCTGGAAATGTTCCATCTTCACTTGCAAAGAATAGGGACATAGATGCAATCTTAAGAGCTGCAGATGAAATACAAGATGATGATCCAAATGTCTCTAGAATCTTATGTGAGCATGCTTATTCATTGTCTCAAAATCTGGATCCTAATAGTGAGGGAAGAGGTGTATTACAGTTCAAGACTGGTTTAATGTCTGTAATCAAGCAAAAGCTAGCAAAAAAGGAGGGCGGAAGTATAGATAGAAGCCAAGACATTGCTTGCTTACAGGAGTTCTATAAGATCTATAGAGAGAAACATAAAGTAGATGAACTGCAAGAGGATGAAATGAAATTGAGGGAGTCTGGCGCATTCAGTGGAAATCTTGGAGAGTTGGAGCGTAAAACAGTGAGAAGAAGAAGAGTTTTTGCAACACTAAAGGTTATAAGGATGGTATTAGAGCAGCTGACTGAGGAGGTTTCTCCTGATGATGCAGAGAGGTCAATTCCTGAAGAGCTGAAACGGGTGATGGAATCAGATGCAGCCATGACTGAGGATCTAATTGCTTATAACATTATCCCTTTGGATGCTCCTACCATCACAAACGCAATTGTATCCTTTCCTGAGGTACAAGCAGCAGTATCAGCTTTAAAGTACTTCCAAGGCCTACCAAAATTGCCCGGGGACTTTTCTATACCTGCGACAAGGAACGCTGATATGCTTGATTTTCTGCAGTGCATTTTTGGATTTCAGAAAGACAATGTTTGTAACCAGCGTGAACATGTTGTTCATCTTCTTGCAAATGAACAGTCACAACTTCGTATTCTTGAAGAAACTGAACCGATATTGGACGAGGCTGCTGTGCGGAATGTATTCATGAAGTCCCTTGGAAACTACATTAACTGGTGCACCTACTTGTGCATTCAGCCAGCATTCAGCAATCCACAAGATGTCAATCGGGAAAAGATGTTACTGTTTGTGTCTCTAAACTTTCTGATATGGGGTGAAGCTGCGAACATTCGATTTCTCCCAGAATGCTTGTGCTACCTTTTTCATCATATGGTACGGGAGTTGGATGAAATGTTACGGCAGCAGATTGCCACTGCCCAACCAGCCAATAGCTGCAAATCAGAAAATGGTGTCTCATTCCTTGATCAAATTATTTCTCCTCTTTATGAAATTGTTGCAGCGGAGGCTGCAAACAATGACAATGGGCGAGCACCTCATTCTGCCTGGAGGAACTATGACGATTTTAATGAGTATTTTTGGTCACTTCATTGCTTTGAACTTGGCTGGCCCTGGAAGAAAGGTTCATCGTTTTTTCTTAAGCCCAAACCCAGATCAAAGAATCTGCTCAAGTCTGGTGGAAGCAAACATAGAGGAAAAACATCGTTTGTTGAGCATCGGACCTTTCTTCATCTTTACCATAGTTTTCATCGCCTGTGGATATTTCTTTTTATGATGTTTCAGGGACTCGCTATCATTGCATTCAATAATGGACATTTCAACTCGAAGACCATACGAGAAGTTCTCAGTCTCGGCCCAACTTTTGTTGTGATGAAGTTTTGTGAGAGTGTTTTAGACATTCTCATGATGTATGGTGCATATTCTACAACACGAAGTGTAGCTGTATCTCGAGTTTTTCTCCGTTTCCTCTGGTTTAGTGTTGCTTCAGTCTTCATATGCTTCCTTTATGTGAAAGCTCTTCAAGAAGAGAGTAAACTAAATGGAAATTCAGTTGTTTTGAGAATCTATGTTTTTGTTCTGGGCATCTATGCTGGTGTCCATATTTTTTTTAGTTCCCTAATGCGAATACCAGCATGCCACCAGCTGACTAATCGATGTGACCATTGGTTTTTAGTTCGCTTTGTGAAGTGGATGCACCAGGAACATTATTATGTTGGACGTGGAATGTATGAGAGGACCACTGATTTTATCAAGTATATGCTTTTTTGGCTCGTTGTTTTAGCTGCCAAATTTTCATTTGCCTATTTTCTCCAGGAAAGTGACATTCATTGCAGTTTCTTTCTCTGA 2106 41.31 MSRVEHLWERLVHAALRSEKAGFDAFGRPVGGIAGNVPSSLAKNRDIDAILRAADEIQDDDPNVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKKEGGSIDRSQDIACLQEFYKIYREKHKVDELQEDEMKLRESGAFSGNLGELERKTVRRRRVFATLKVIRMVLEQLTEEVSPDDAERSIPEELKRVMESDAAMTEDLIAYNIIPLDAPTITNAIVSFPEVQAAVSALKYFQGLPKLPGDFSIPATRNADMLDFLQCIFGFQKDNVCNQREHVVHLLANEQSQLRILEETEPILDEAAVRNVFMKSLGNYINWCTYLCIQPAFSNPQDVNREKMLLFVSLNFLIWGEAANIRFLPECLCYLFHHMVRELDEMLRQQIATAQPANSCKSENGVSFLDQIISPLYEIVAAEAANNDNGRAPHSAWRNYDDFNEYFWSLHCFELGWPWKKGSSFFLKPKPRSKNLLKSGGSKHRGKTSFVEHRTFLHLYHSFHRLWIFLFMMFQGLAIIAFNNGHFNSKTIREVLSLGPTFVVMKFCESVLDILMMYGAYSTTRSVAVSRVFLRFLWFSVASVFICFLYVKALQEESKLNGNSVVLRIYVFVLGIYAGVHIFFSSLMRIPACHQLTNRCDHWFLVRFVKWMHQEHYYVGRGMYERTTDFIKYMLFWLVVLAAKFSFAYFLQESDIHCSFFL* 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1288326 1347015 + Vvi6g115 Vvi6g115 787692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g115 701 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 347 456 IPR026899 -
Vvi6g115 701 Gene3D - 34 186 IPR023175 -
Vvi6g115 701 PANTHER BNAC03G35120D PROTEIN 1 692 - -
Vvi6g115 701 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 692 - -
Vvi6g115 701 SMART FKS1_dom1_2 345 459 IPR026899 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g115 K11000 - vvi:100232893 1400.96