Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g117 ATGGATGCTCTTCATGTCCCTCTTCCCAACAGGACTTCCCGTCAATCTTCTAGTGAGAATGTGGAGCAAGGCAAGTTTGATGCTGCTCGATTCTCCCCATTTTGGAATGAAATTATAAATAATTTAAGGGAAGAAGATTACATCAATGATTTGGAAAAGGAGTTGCTTCTTATGCCTAAAAATTCTGGAAAACTTCCCTTAGTTCAGTGGCCCCTTTTCCTTCTTAGCAGCAAGATATTTTTAGCAAAAGATATTGCAGTAGAAAGTAGAGGAGATTCTCAAGATGTTCTTTGGGAAAGGATTTGTAGAGATGACTACATGAAATATGCTGTTGAAGAGTGCTTTCACACCATTAAACTTATCCTGATGGAAATATTGGAAGGTGAAGGAAGGATGTGGGTGGATAGGTTGTATGAAGATATTCAAGGAAGTATAGCAAAGAAGAGTATTCATGTTGACTTCGAGCTAAGTAAGCTGCCACTTGTGATTTCAAGACTTACTGCCCTTTTGGGACCAATGAAAGAAGAGGAAAAGCCTGATTCTGTGAGTGGTGCTGTTAAAGCTGTTCAAGATCTCTATGATGTTGTGCGACATGATGTCCTTTCTATTAATATGAGGGATCATTATGAGACATGGAATCAGTTGTCAAAAGCAAGGACTGAAGGACGCTTATTTTCAAAGTTGAAATGGCCAAAAGATGCTGAGACGAGAGCACAAGTTAAAAGATTATGTTCACTTTTAACCATCCAAGATTCCGCTGCAAATATTCCCAATAATCTTGAGGCCAGACGTAGGCTGCAGTTTTTCACAAATTCCCTTTTCATGAAGATGCCTGCAGCTAAGCTAGTCCGTGAGATGTTGTCTTTCAGTGTGTTCACTCCATATTATTCTGAGACTGTGCTTTATAGTATGGATGAACTCCAAAAGAAAAATGAGGATGGAATATCAACATTGTTTTACCTCCAGAAAATTTTTCCAGATGAGTGGAAAAACTTTCTTGCTCGGATTAATCGGGATGAGAATGCACAAGATTCAGAACTTTATGATAGTCCTAGAGATGTCCTTGAGCTTAGATTTTGGGCTTCTTACCGGGGACAAACATTAGCAAGAACTGTTCGTGGAATGATGTACTATAGGAAAGCTCTTATGCTTCAGAGTTATTTGGAAAGGAATGCTGCTGGAGATGTTGAAGCTGCGATTTCTAGTGATGTTGCAACTGATACTCAAGGTTATGAGTTTTCTCCTGCGGCACGAGCTCTGGCAGATCTGAAGTTTACATATGTTGTTACATGTCAAATATATGGAATACAAAGAGAAGAGCAAAAACCTGAGGCTGTGGATATTGCATTGCTAATGCAACGAAATGAAGCTCTTCGAGTTGCTTACATTGATTCCGTTGAGACTCTGAAGGATGGTATAGTGCAGACAGAGTTCTATTCTAAACTTGTGAAAGCTGATATCAATGGGAAAGATCAGGACATATACTCTATCAAATTACCAGGAAATCCTAAACTTGGTGAAGGAAAACCTGAAAATCAAAACCATGCAGTTATATTTACTCGTGGAAATGCAATTCAAACGATTGACATGAATCAGGATAATTATTTTGAGGAAGCCCTGAAGATGAGAAATCTTCTTGAAGAGTTCCATACAGACCATGGCATTCGTCCTCCTACCATTCTTGGTGTTCGGGAACATGTCTTCACCGGAAGTGTCTCTTCTTTAGCCTTATTTATGTCCAATCAAGAAACTAGCTTTGTTACTCTAGGCCAGCGTGTTCTGGCAAAACCTTTAAAGGTTCGTATGCATTATGGCCATCCAGATGTTTTTGATAGAGTTTTCCATATAACACGAGGTGGTATCAGCAAGGCCTCTCGAGTTATCAACATTAGTGAAGATATATATGCTGGATTCAATTCAACATTGCGCCAAGGGAATGTTACTCATCATGAATATATTCAGGTTGGAAAAGGACGAGATGTTGGACTCAATCAGATTGCTCTATTTGAAGGGAAAGTTGCTGGTGGTAATGGTGAACAAGTTCTCAGTCGAGACATTTACAGACTTGGGCAGCTCTTTGATTTCTTCCGAATGATGTCATTCTACTTTACGACTGTTGGATACTATTTCTGTACTATGTTGACAGTGCTCACGGTATACGCTTTCCTTTATGGGAAGGCATATTTGGCACTATCTGGAATAGGAGAACAACTTCAAATAAGAGCACAGATATTGAACAACACTGCTCTGACCACGGCTCTCAATACACAGTTTCTTTATCAGATTGGTATGTTTACTGCTGTGCCAATGGTTTTGGGTTTCATCCTGGAGGAGGGTTTTCTAAGGGCTGTTGTCAGTTTTGTCACTATGCAGTTTCAGCTCTGTTCTGTCTTCTTCACTTTTTCTCTGGGCACAAGAACACATTATTTTGGTCGGACTATTCTTCATGGGGGTGCAAGGTATCAAGCAACTGGTAGGGGATTTGTCGTCCGCCATATTAAATTTTCTGAGAATTATCGGCTTTACTCCCGTAGTCATTTTGTTAAAGGATTAGAGGTTGTGCTTTTGTTGATAGTATACCTTGCATATGGGTATAACGAAGGCGCACTATCGTACATTCTTCTTAGCATTAGCAGTTGGTTCATGGCTCTTTCTTGGCTTTTTGCTCCCTATTTGTTCAATCCATCTGGTTTTGAGTGGCAGAAGACTGTGGAGGACTTTCGGGATTGGACAAACTGGCTTTTTTACAGAGGTGGAATTGGAGTTAAGGGAGGAGAAAGCTGGGAGGCTTGGTGGGATGAAGAACTGGCACATATTCGGACCTTTGGTGGGAGACTAGCTGAGACCATTCTGAGCCTAAGATTCTTTATCTTCCAGTATGGCATCATCTACAAGCTAGATGTACAAAGACAGAATACATCTTTAACGGTATACGGCCTATCATGGATCGTGTTGGCTGTGCTAATAATTCTCTTCAAGGTGTTCACCTTCAGCCAGAAGATCTCAGTGAACTTCCAGCTGCTGTTGCGCTTCATCCAAGGCATTTCATTACTGCTTGCCTTGGCTGGCATAGTCATAGCAATTGCAATGACACCTCTATCAATTACCGACATATTTGCTTGCATCTTAGCTTTTATACCTACTGGGTGGGGGATTATTTCGATTGCTGTGGCTTGGAAGCCTTTAATGAAGAAGCTGGGATTCTGGAAATCCATCCGCTCAATGTCCCGTTTATACGATGCAGGAATGGGAATGCTCATCTTCATTCCCATAGCCTTCTGCTCATGGTTCCCATTCGTATCAACATTCCAAACCCGGCTCATGTTCAACCAAGCATTCAGCAGAGGCCTGGAAATCTCTCTTATCCTCGCCGGAAACAATCCCAACACTGGAATATGA 3399 40.95 MDALHVPLPNRTSRQSSSENVEQGKFDAARFSPFWNEIINNLREEDYINDLEKELLLMPKNSGKLPLVQWPLFLLSSKIFLAKDIAVESRGDSQDVLWERICRDDYMKYAVEECFHTIKLILMEILEGEGRMWVDRLYEDIQGSIAKKSIHVDFELSKLPLVISRLTALLGPMKEEEKPDSVSGAVKAVQDLYDVVRHDVLSINMRDHYETWNQLSKARTEGRLFSKLKWPKDAETRAQVKRLCSLLTIQDSAANIPNNLEARRRLQFFTNSLFMKMPAAKLVREMLSFSVFTPYYSETVLYSMDELQKKNEDGISTLFYLQKIFPDEWKNFLARINRDENAQDSELYDSPRDVLELRFWASYRGQTLARTVRGMMYYRKALMLQSYLERNAAGDVEAAISSDVATDTQGYEFSPAARALADLKFTYVVTCQIYGIQREEQKPEAVDIALLMQRNEALRVAYIDSVETLKDGIVQTEFYSKLVKADINGKDQDIYSIKLPGNPKLGEGKPENQNHAVIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHTDHGIRPPTILGVREHVFTGSVSSLALFMSNQETSFVTLGQRVLAKPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYAGFNSTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDIYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKAYLALSGIGEQLQIRAQILNNTALTTALNTQFLYQIGMFTAVPMVLGFILEEGFLRAVVSFVTMQFQLCSVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNEGALSYILLSISSWFMALSWLFAPYLFNPSGFEWQKTVEDFRDWTNWLFYRGGIGVKGGESWEAWWDEELAHIRTFGGRLAETILSLRFFIFQYGIIYKLDVQRQNTSLTVYGLSWIVLAVLIILFKVFTFSQKISVNFQLLLRFIQGISLLLALAGIVIAIAMTPLSITDIFACILAFIPTGWGIISIAVAWKPLMKKLGFWKSIRSMSRLYDAGMGMLIFIPIAFCSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI* 1133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1350307 1408792 + Vvi6g117 Vvi6g117 787694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g117 1132 MobiDBLite consensus disorder prediction 1 24 - -
Vvi6g117 1132 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 1130 - -
Vvi6g117 1132 Pfam 1,3-beta-glucan synthase component 256 947 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vvi6g117 1132 PANTHER BNAC03G35120D PROTEIN 1 1130 - -
Vvi6g117 1132 MobiDBLite consensus disorder prediction 9 23 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g117 K11000 - vvi:100232893 2246.08