Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi6g1179 | ATGCTAGACCACCCCTTCCTCCCCGCGCTCTACGCCACCATCGACTCTCCGAAGTGCTCCTGCCTCCTCACCGAGTTCTGCCCTGGCGGCGACCTCCACGTTCTCCGGCAGCGCCAGCCGGCGAAGCGCTTCCACGAATCCGCCGTCAGGTTCTATGCATCAGAGGTGGTGGTGGCCCTGGAGTATGTTCACATGATGGGGATCGTCTACCGTGATCTCAAGCCTGAAAATGTGCTAGTTCGATCTGATGGCCACATCATGCTCACTGATTTTGACCTATCGTTAAAATGTGACCATTCCACATCAGTTGCTCAGATCATTTCTGATCAAAATCCACCCCTTGCACTCCCACCAAGCCATCATGGGGGGCCTGAGTTTGTGGCTGAGCCAGTTGATGTTCGATCAATGTCATTTGTTGGGACACATGAGTATTTGGCCCCTGAGATTGTTTCTGGGGAGGGCCATGGCAGTGCTGTAGATTGGTGGACGCTAGGAATATTCATATTTGAATTATTGTATGGAGTGACACCATTTAGAGGTGTGGACAATGAGCTAACCCTAGCTAATATTGTGGCTCGAGCCCTTGAGTTCCCTAAAGAGCCATTGGTGCCTGCAACGACTAAGGACCTCATCTCTCAACTGTTGGTTAAGGACCCTGCAAGGCGAATGGGATCCACAATGGGTGCCTCAGCAATCAAACACCACCCGTTCTTCCAAGGGGTCAATTGGGCACTTTTAAGATGCACGCCCCCACCATTCATCCCCCCACCTTTCAATCGAGATGTTGTATCAGATGAAAGTTGCCCGGAAACACCAATGGACTATTATTAG | 831 | 51.38 | MLDHPFLPALYATIDSPKCSCLLTEFCPGGDLHVLRQRQPAKRFHESAVRFYASEVVVALEYVHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDHSTSVAQIISDQNPPLALPPSHHGGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELLYGVTPFRGVDNELTLANIVARALEFPKEPLVPATTKDLISQLLVKDPARRMGSTMGASAIKHHPFFQGVNWALLRCTPPPFIPPPFNRDVVSDESCPETPMDYY* | 277 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 19464014 | 19467635 | + | Vvi6g1179 | Vvi6g1179 | 788756 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi6g1179 | 276 | PANTHER | OS11G0150700 PROTEIN | 1 | 117 | - | - | |
Vvi6g1179 | 276 | PANTHER | OS11G0150700 PROTEIN | 120 | 276 | - | - | |
Vvi6g1179 | 276 | Gene3D | Transferase(Phosphotransferase) domain 1 | 31 | 256 | - | - | |
Vvi6g1179 | 276 | PANTHER | FLIPPASE KINASE 1-RELATED | 120 | 276 | - | - | |
Vvi6g1179 | 276 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 117 | - | - | |
Vvi6g1179 | 276 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 68 | 80 | IPR008271 | GO:0004672|GO:0006468 | |
Vvi6g1179 | 276 | ProSiteProfiles | Protein kinase domain profile. | 1 | 238 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi6g1179 | 276 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 30 | - | - | |
Vvi6g1179 | 276 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 269 | IPR011009 | - | |
Vvi6g1179 | 276 | SMART | serkin_6 | 1 | 238 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vvi6g1179 | 276 | Pfam | Protein kinase domain | 2 | 238 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
76689 | PF00069 | Pkinase | 9.90E-46 | CL0016 | Vvi | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi6g1179 | K08286 | - | vvi:100263703 | 545.043 |