Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g121 ATGGCGGCTTCTTTGGTTCGACTTCACTTCCATGATTGCTTTGTGAATGGTTGCGATGGATCGGTTTTGCTAGATGGAAGTGATGGAGAGAAGTCTGCCTTACCCAACTTGAACTCAGTGAGAGGATTCGACGTTGTGGACACAATAAAAAGTTCTGTGGAGAGCGCATGTCCAGGAGTTGTTTCCTGCGCTGACATACTAGCCATAGCCGCCCGAGACTCCGTTCTCCTGAGTGGAGGAAATACATGGAAAGTATTTTTAGGAAGAAGAGATGGACTAGTTGCAAACCAGACAGGAGCAAATAATGGACTTCCTTTTCCAACTGATTCCTTGGATACAATCACTCAGAAATTTGCCAATGTCGGCCTCAATCAGACCGATGTCGTGTCGTTATCAGGTGCGCATACAATCGGATTAGCAAGATGTACTACCTTCAGCAGCAGATTGTTCAACTTCAGCGGAACAGGCGCTGCTGACTCTACAATGGACACGGAAATGCTCTGA 504 46.63 MAASLVRLHFHDCFVNGCDGSVLLDGSDGEKSALPNLNSVRGFDVVDTIKSSVESACPGVVSCADILAIAARDSVLLSGGNTWKVFLGRRDGLVANQTGANNGLPFPTDSLDTITQKFANVGLNQTDVVSLSGAHTIGLARCTTFSSRLFNFSGTGAADSTMDTEML* 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1429342 1431684 + Vvi6g121 Vvi6g121 787698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g121 167 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PRINTS Plant peroxidase signature 41 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PRINTS Plant peroxidase signature 60 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PRINTS Plant peroxidase signature 79 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PRINTS Plant peroxidase signature 126 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 Gene3D - 1 104 - -
Vvi6g121 167 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Vvi6g121 167 Gene3D Peroxidase, domain 2 105 166 - -
Vvi6g121 167 PANTHER PEROXIDASE 59 1 167 - -
Vvi6g121 167 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PRINTS Haem peroxidase superfamily signature 61 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PRINTS Haem peroxidase superfamily signature 79 91 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PRINTS Haem peroxidase superfamily signature 127 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 ProSitePatterns Peroxidases proximal heme-ligand signature. 127 137 IPR019793 -
Vvi6g121 167 Pfam Peroxidase 1 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 PANTHER PEROXIDASE 72-RELATED 1 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 SUPERFAMILY Heme-dependent peroxidases 1 165 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi6g121 167 ProSiteProfiles Plant heme peroxidase family profile. 1 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g121 K00430 - vvi:100253646 333.569