Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g128 ATGAAAAGAATTCCGAAAAGCGAAGTGAAGCCAGGAAAGGGGAATCAAAATCTCCACTCAGAAGACACGGAGTCGACCCGTCACAGTCAACAAGGCACGGCGGATCGGAGAGTTCTTCGGTCTCGATATCTAGCTGTGAAGAATCTGATCAGTGATAAAAGAGATGATATATCGAGAGTAGGTTCCGATAAATTTAAGTCTATTATTAGCGAAGTGGAGAACCTGCATCAGTTTGTTCAGAAGCCAAGAGAGCAAGTTGCAGATGCAGAGGCTCTATTGGACATTGCTAACACCTTGGTGACCTCTGTCAAGTCACAGACCAATGCTGGTGTTACACCATCCGACTTAGTAACATGTTTCCTCAGCAAATATGGGCAACATGGAGGAGGATTCACCACAGAAAATCCTCGAATCCACTGGAAAAAAATTGGGATTGTTGTTTCACCCATTTTCAGAAAAGGGCAAGGGTGTTGCACCATGCTTGGACCTATGAACACTGAGTTGAAGCAAAGGAAAGTTGCTGTTCATCAAAAGCGTTCGAGGCAGCCTACTGAAAGCACTCGACCTGAAGAGCTTAATAATTATGGGGAAGAACACAGATCGGATACTGACAAGAATATGGCAACCATGTTTGAGATTCTGAGGAGGAAGAAGCAAGTCAAGCTTGAAAGCCTCATGTTGAACAGGAAGTCCTTTGCGCGGACAGTGGAGAACTTGTTTGCTCTGTCTTTCTTAGTCAAAGATGGACGAGCTGAAGTAGTTGTTGATGAGAATGGCTCACATTTAGTCTCACCTAAGAATGCTCCCGCTGCTAGTTCTGTGGTTGCCAGAGAGGTGGTTTACTCGCATTTTGTATTCAGATTTGACTTCAAAGACTGGAAGTCCTTTGTTCTCCAGTACCTTAACTTACAGCTGTTTATTGGCATTGATGTATCACAATATTTGATGATGGACTTGGTGCCAGCTGGGGAAGAGCTAATGCCACACAGGGATCGATCAAAAGGCCTGAATGCATCTCAGGCAGGCTTGGCACCTAATGATTACCAAGATACACTTCACGCAACACCAATCAAGAAATTTTCCAGGAATTGTGGCCTTGTCATACAAGAACAACTAGTCGTAAAAGAGGACCCTGATACAGGAGATGCTGCAGGTCGGAGATGTAGCAAGAGAGCAAGTCCTTTAGCTGATATTCCCACTGAGATGGTTTCAACTTTTTGA 1221 44.31 MKRIPKSEVKPGKGNQNLHSEDTESTRHSQQGTADRRVLRSRYLAVKNLISDKRDDISRVGSDKFKSIISEVENLHQFVQKPREQVADAEALLDIANTLVTSVKSQTNAGVTPSDLVTCFLSKYGQHGGGFTTENPRIHWKKIGIVVSPIFRKGQGCCTMLGPMNTELKQRKVAVHQKRSRQPTESTRPEELNNYGEEHRSDTDKNMATMFEILRRKKQVKLESLMLNRKSFARTVENLFALSFLVKDGRAEVVVDENGSHLVSPKNAPAASSVVAREVVYSHFVFRFDFKDWKSFVLQYLNLQLFIGIDVSQYLMMDLVPAGEELMPHRDRSKGLNASQAGLAPNDYQDTLHATPIKKFSRNCGLVIQEQLVVKEDPDTGDAAGRRCSKRASPLADIPTEMVSTF* 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 1568992 1572434 - Vvi6g128 Vvi6g128 787705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g128 406 Pfam Nse4 C-terminal 219 299 IPR014854 -
Vvi6g128 406 MobiDBLite consensus disorder prediction 1 35 - -
Vvi6g128 406 MobiDBLite consensus disorder prediction 1 37 - -
Vvi6g128 406 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 17 296 - -
Vvi6g128 406 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 315 387 - -
Vvi6g128 406 MobiDBLite consensus disorder prediction 172 201 - -
Vvi6g128 406 PANTHER UNCHARACTERIZED 315 387 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vvi6g128 406 PANTHER UNCHARACTERIZED 17 296 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vvi6g128 406 MobiDBLite consensus disorder prediction 178 201 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g128 Vvi8g1257 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g128 K22825 - vvi:100258687 725.317