Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g14 ATGAAGATATATATAGTTATTCACAACCTCTTCTTGATTTTGGGAGTGTTATTTATATCTCAGATAGGTAGATCAGCATCAAAATCTCTGCTTTCCACAAACCCATTTCTGGGAATTGCTCCTCAAGATGAGAACTACTACAAGACTTCATCAGAGATATTCAAATGCAAAGATGGATCAAAGAAATTGAACAGAGCACAGGTCAATGACGACTTCTGCGATTGCCCTGATGCCTCCGATGAGCCTGGAACTTCGGCATGCCCGGGTGGAAAATTCTATTGTCGGAATGCAGGACATGTTCCTCTGTTGTTATTTTCCTCTAGAGTGAACGATGGTATCTGCGATTGCTGCGATGGGAGTGATGAGTATGATGGTAAAGTAAAATGTCCAAACACATGTTGGGAGGCTGGAAAAGTGGCCAGAGATAAGTTAAAGAAAAAGATTGTAACATATAAAGAAGGAGTCACTCTACGGAAGCAACAGATTGAGCAAGCAAAACTGGCAATAGCTAAAGAGGAGGAAGAATTATCAAAGCTAAAAAGTGAAGAGAAAATATTGAAAGGGCTTGTTCAGCAGCTCAAGGACCGTAAAGAACAGATAGAGAAGGCAGAGGAGAAAGAGCGCCTACAGAAAGAAGAAGAAGAGAAGAAGCGGAGAGAGGCTGAGGAGGAAGCTAATAAGGAGAAAAGCAAAGCTGAGAAGGAAGCTAATCAGGAGAAAAATGAAGTTAAGGAGCAAGTTGGCAGTGAAGAAGAACCTATGGAAAGTACCCATGATGATAAAATTGGAGTTTTGGATCAGGATGTAGAAGAGGACAAAAGCAACTCAGTAGCTGAAGTTGAGCATACTGATAAATCTGAAAATGCATCTCCAACTGATGGAATTGAGCAGCATGCAGCAGAAGGCAAGGAAGAGTCCCCAGTCGTACATGAAACTGACCTTCATGCTGGAAATGAGGTGTCTCCAACTTCCGATCAAGCTACAAAACAGGAGAATGATGTAGCTGAAAATACTGAGGGATTGTCAAGGGAAGAGTTGGGCCGCCTTGTTGCTTCTCGTTGGACAGGGGAAAATACTGGGCAGCACACTGAGGAAGTTGATGCTGTGAAACATGATCATCATGAAAGCCACGAAGAGACACCAGAGGACACACATGCTGAGGAATATGACGGCTATGCATCAGAAACCGATGATGACAGCCAAAGATATGACAATGATGATATGGAAGATCCAGTTGATGAAGATTTTGGAGAGGATGATCACTATGATTCAAGCCCTCCATACAAATCTGACACAGAAGATGAATCAGATTTTTCAGATATAACAAGCACAAGTAACCCATCGTGGTTGGAGAAGATACAACAAACAGTGCGGAACATTCTAAATGCTGTTAACTTGTTCCAGACCCCAGTAGATAAATCAGAGGCTGCTCACATACGCAAGGAATATGACGAGTCCAGTGCCAAGTTGTCTAAGATGCAGTCTAGAATATCAAGTTTGACACAAAAGCTAAAGCATGATTTTGGGCCTGAGAAGGAATTCTATTCATTCTATGATCAATGTTTTGAGAGCAAGGAGAACAAGTATGTATACAAATTATGCCCATTTAAACAAGCTTCCCAGGAGGAGGGCCATAGTACTACTCGTTTGGGGCGCTGGGATAAATTTGAAGATTCATACAGAACTATGCTGTTTTCAAATGGCGAAAAATGCTGGAATGGACCTGATAGGAGTTTGAAGGTCAAGCTAAGATGTGGGTTGAAAAATGAGGTTACTGATGTTGATGAACCAAGCAGATGCGAATATGTGGCATTGTTATCCACCCCAGCTCTTTGCCTAGAAGAAAAGCTGAAGGAACTACAACAGAAACTAGAGTTGATGAACCAGGAACAACCTCAGGGCCGTGATGAACTCTAA 1917 41.99 MKIYIVIHNLFLILGVLFISQIGRSASKSLLSTNPFLGIAPQDENYYKTSSEIFKCKDGSKKLNRAQVNDDFCDCPDASDEPGTSACPGGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDGKVKCPNTCWEAGKVARDKLKKKIVTYKEGVTLRKQQIEQAKLAIAKEEEELSKLKSEEKILKGLVQQLKDRKEQIEKAEEKERLQKEEEEKKRREAEEEANKEKSKAEKEANQEKNEVKEQVGSEEEPMESTHDDKIGVLDQDVEEDKSNSVAEVEHTDKSENASPTDGIEQHAAEGKEESPVVHETDLHAGNEVSPTSDQATKQENDVAENTEGLSREELGRLVASRWTGENTGQHTEEVDAVKHDHHESHEETPEDTHAEEYDGYASETDDDSQRYDNDDMEDPVDEDFGEDDHYDSSPPYKSDTEDESDFSDITSTSNPSWLEKIQQTVRNILNAVNLFQTPVDKSEAAHIRKEYDESSAKLSKMQSRISSLTQKLKHDFGPEKEFYSFYDQCFESKENKYVYKLCPFKQASQEEGHSTTRLGRWDKFEDSYRTMLFSNGEKCWNGPDRSLKVKLRCGLKNEVTDVDEPSRCEYVALLSTPALCLEEKLKELQQKLELMNQEQPQGRDEL* 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 264279 274992 - Vvi6g14 Vvi6g14 787591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g14 638 MobiDBLite consensus disorder prediction 363 399 - -
Vvi6g14 638 MobiDBLite consensus disorder prediction 317 335 - -
Vvi6g14 638 Pfam Glucosidase II beta subunit-like 33 182 IPR028146 -
Vvi6g14 638 Coils Coil 155 249 - -
Vvi6g14 638 MobiDBLite consensus disorder prediction 400 420 - -
Vvi6g14 638 MobiDBLite consensus disorder prediction 204 312 - -
Vvi6g14 638 ProSiteProfiles MRH domain profile. 519 614 IPR044865 -
Vvi6g14 638 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 12 638 IPR039794 -
Vvi6g14 638 MobiDBLite consensus disorder prediction 204 445 - -
Vvi6g14 638 Gene3D - 514 612 IPR009011 -
Vvi6g14 638 PANTHER BNACNNG14010D PROTEIN 12 638 - -
Vvi6g14 638 Gene3D - 82 135 IPR036055 GO:0005515
Vvi6g14 638 MobiDBLite consensus disorder prediction 421 436 - -
Vvi6g14 638 Pfam Glucosidase II beta subunit-like protein 480 623 IPR036607 -
Vvi6g14 638 SUPERFAMILY Mannose 6-phosphate receptor domain 519 612 IPR009011 -
Vvi6g14 638 Coils Coil 610 637 - -
Vvi6g14 638 Coils Coil 483 503 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g14 K08288 - vvi:100255312 1165.6