Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g181 ATGGGAGGAGTTTCTGCAGCTGTGTCTAAAACAGCAGCTGCTCCAATTGAGCGTGTGAAGCTTTTGATCCAAAACCAGGATGAAATGATTAAGGCTGGACGGCTTTCTGAACCCTATAAGGGAATTGGAGATTGTTTTAGCCGAACAATCAAAGATGAAGGATTTGCATCATTATGGAGAGGGAACACGGCTAATGTCATCCGTTACTTCCCAACTCAGGCATTGAACTTTGCTTTCAAGGATTACTTTAAGAGACTGTTCAACTTTAAGAAGGACAGGGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGTGGTGCTGCTGGTGCTTCTTCCCTACTCTTTGTCTATTCCCTTGATTATGCCCGAACCCGTCTTGCAAATGATGCAAAAGCTGCAAAGAAAGGAGGAGGAGACAGGCAATTCAATGGCTTGGTTGATGTCTACAGAAAGACTCTCAAATCAGATGGGATTGCTGGGCTTTACCGAGGATTCAACATCTCATGTGTTGGTATCATTGTGTACCGTGGTCTCTATTTTGGAATGTACGATTCTCTGAAGCCAGTGATCCTGACTGGAAAGCTACAGGATAGTTTCTTCGCTAGCTTTGCTCTTGGTTGGGTTATCACAAACGGTGCAGGCCTCGCCTCCTATCCAATTGACACAGTCCGCAGAAGAATGATGATGACATCAGGTGAAGCCGTGAAGTACAAGAGTTCCTTGGATGCATTCAATCAGATCCTTAAGAATGAGGGTGCGAAATCTCTCTTCAAGGGTGCTGGTGCAAACATTCTTCGTGCAGTTGCTGGTGCCGGTGTGCTTGCTGGTTATGACAAGCTTCAGGTGCTTGTGTTGGGAAAGAAGTATGGTTCCGGTGGAGCCTAA 891 45.79 MGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFSRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGDRQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVILTGKLQDSFFASFALGWVITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFNQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVLGKKYGSGGA* 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2358408 2360477 + Vvi6g181 Vvi6g181 787758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g181 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 86 IPR018108 -
Vvi6g181 296 Pfam Mitochondrial carrier protein 200 286 IPR018108 -
Vvi6g181 296 Pfam Mitochondrial carrier protein 1 90 IPR018108 -
Vvi6g181 296 Pfam Mitochondrial carrier protein 97 193 IPR018108 -
Vvi6g181 296 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 296 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g181 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 98 191 IPR018108 -
Vvi6g181 296 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 1 296 - -
Vvi6g181 296 PRINTS Mitochondrial carrier protein signature 11 25 IPR002067 GO:0055085
Vvi6g181 296 PRINTS Mitochondrial carrier protein signature 61 81 IPR002067 GO:0055085
Vvi6g181 296 PRINTS Mitochondrial carrier protein signature 113 131 IPR002067 GO:0055085
Vvi6g181 296 PRINTS Mitochondrial carrier protein signature 164 182 IPR002067 GO:0055085
Vvi6g181 296 PRINTS Mitochondrial carrier protein signature 208 230 IPR002067 GO:0055085
Vvi6g181 296 ProSiteProfiles Solute carrier (Solcar) repeat profile. 199 285 IPR018108 -
Vvi6g181 296 PRINTS Adenine nucleotide translocator signature 39 60 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g181 296 PRINTS Adenine nucleotide translocator signature 72 84 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g181 296 PRINTS Adenine nucleotide translocator signature 98 111 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g181 296 PRINTS Adenine nucleotide translocator signature 204 220 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Vvi6g181 296 SUPERFAMILY Mitochondrial carrier 2 281 IPR023395 -
Vvi6g181 296 Gene3D Mitochondrial carrier domain 1 292 IPR023395 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g181 K05863 - vvi:100260298 559.681