Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g195 ATGGCTGAAATAGAGAATTTGGAACCGGATTTGGAGGAGCTGAGGGAGAGCTACAGGAGTGGCAAAACAAAGGAAGCCTCATGGAGGAAGTCACAACTCAAGGGTTTGCTCACTCTCCTCAAGGAACAGGAAAAGGATATCTTTAAGGCCCTTGAGCAAGATCTAGGCAAACATTATGCCGAGTCCTACAGAGATGAGGTGGGAACCCTAACAAAATCTGTGAATCTTGCATTGAGTTCCTTGAAAGACTGGATGTCAAGCAGAAAGGCTAAATTACCAATAGCTACATTCCCCTCAACAGCAGAAGTGTTTCCAGAGCCTCTTGGCCTTGTTCTCATTATCTCTTCTTGGAATTTTCCCTTTGGGCTGTCCCTGGAACCAGTGATTGGAGCAATAGCAGCAGGAAACTCAGTAGTTCTAAAGCCTTCAGAGCTGGCTCCAGCCAGCTCTTCTCTTCTAGCAAAAACCATTCCTACTTACCTAGACAAAAAAGCTGTCAAGGTCATCGAGGGCGGGGCCGCCGTTGGCGAACATCTCCTCCGCTGTAAATGGGACAAGATCTTCTTCACAGGAAACCCCCGAGTGGGACGTGTTGTAATGACTGCAGCTGCTAATCATCTAACGCCTGTTACATTGGAGCTGGGTGGAAAATGTCCAGCCATATTTGATTCATTTTCAAGTTCTTGGGACAAAGAGATGGTGATAAAACGAGTTCTTGGAGGGAAATTCGGGGCCTGCGCCGGTCAAGCATGCATAGCGATCGATTACATCCTAGTCCAAGAAGGATTTGCACCCACCTTGCTAGAATTGTTGAGGAACATGACCAAGAAAATGTTTGGTGAAAACCCTAGAGAAACAAAAAGCATGGCAAGGATAATCAACAAAAAACATTTCTTAAGGCTGAAGAACATTCTTGATGATCCCTCAGTCCAATCTTGTATTGTCCATGGCGGTGGGGTGGATGAAGACAACTTGTTCATCGAGCCAACGATCTTGATGAATCCTCCTCTCAAAGCTTCCATTATGACCGACGAAATCTTCGGTCCATTGCTTCCTATAATTACATTAAAGAAGATTGAAGACAGCATTGAGTTCATAAACTCAAGGCCTAAAGCACTAGCCATTTATGTCTTCACCAAAAATGAAACTTTGAAGAGAAGGATAATCTCCGAGACATCATCGGGAAGCGTGACCTTCAACGATGCAATCATTCAGTATGCAGCAGACACCATCCCTTTTGGAGGCGTTGGCGAATCTGGTTTTGGGAGGTACCATGGGAAGTTCTCCTTCGACACCTTCACACACGAGAAGGCGATCCTAAGAAGAAGCTTGCTCACTGAGTTCTGGTTTAGATTTCCTCCGTGGAATGACTTTAAGTTGGCACTCACCAAGTCAGCTTACCGCTTCGATTACTTTGAATTCCTGCTTGTCCTCTTGGGCTTGAAGAAAAATTCTTAA 1458 45.13 MAEIENLEPDLEELRESYRSGKTKEASWRKSQLKGLLTLLKEQEKDIFKALEQDLGKHYAESYRDEVGTLTKSVNLALSSLKDWMSSRKAKLPIATFPSTAEVFPEPLGLVLIISSWNFPFGLSLEPVIGAIAAGNSVVLKPSELAPASSSLLAKTIPTYLDKKAVKVIEGGAAVGEHLLRCKWDKIFFTGNPRVGRVVMTAAANHLTPVTLELGGKCPAIFDSFSSSWDKEMVIKRVLGGKFGACAGQACIAIDYILVQEGFAPTLLELLRNMTKKMFGENPRETKSMARIINKKHFLRLKNILDDPSVQSCIVHGGGVDEDNLFIEPTILMNPPLKASIMTDEIFGPLLPIITLKKIEDSIEFINSRPKALAIYVFTKNETLKRRIISETSSGSVTFNDAIIQYAADTIPFGGVGESGFGRYHGKFSFDTFTHEKAILRRSLLTEFWFRFPPWNDFKLALTKSAYRFDYFEFLLVLLGLKKNS* 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2522292 2528457 - Vvi6g195 Vvi6g195 787772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g195 485 Pfam Aldehyde dehydrogenase family 22 439 IPR015590 GO:0016491
Vvi6g195 485 CDD ALDH_F3FHI 7 441 - -
Vvi6g195 485 PIRSF ALDH 1 477 IPR012394 GO:0006081
Vvi6g195 485 SUPERFAMILY ALDH-like 12 455 IPR016161 GO:0016491
Vvi6g195 485 PANTHER ALDEHYDE DEHYDROGENASE 10 484 - -
Vvi6g195 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Vvi6g195 485 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Vvi6g195 485 PANTHER ALDEHYDE DEHYDROGENASE 10 484 IPR012394 GO:0006081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g195 K00128 - vvi:100253650 949.888