Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi6g20 | ATGGCCTCTTCTTTTCAGTGTTTTTGGGGCCTATTCTTCTCACTTTCCATCTATTTTATTCAAGCCACACCTACATCTAATGTTTACATAGTCTATTTAGGGCTCAACCAGTCCCATGATCCTCTTCTCACTTCAAAACACCATCACCAACTCCTATCTAATGTGTTTGAATGTGAAGAAGCGGCAAAGCAATCCATTCTCTATCACTACAAGCATAGCTTCTCAGGGTTTGCAGCAAAGCTCAATGAAAATCAAGCAAACATATTAGCCAAGATGGAAGGAGTGGTATCAGTGTTTAGGAGCAGGACGATGAAATTGCACACAACCAGAAGCTGGGATTTCATGGGTCTCACTTTGGACGAGAGCAGTGAAGTGACTCCATTGCAGCTAGCCTATGGTGATGACATAGTTGTCGGAGTCCTTGATTCAGGTGTTTGGCCAGAATCTAAGAGTTTCCAGGAAGAGTCTTGCTTGGGGCCTATTCCTTCATGTTGGAAAGGAAAATGTGTTAAAGGTGAAATGTTTGACCCCAAAAGGGACTGCAATCGAAAGTTAATTGGTGCCCAATACTACCACAAGGGGTTTGAAGAAGAATTTGGGCCAGTGAACCCTAGAACCTTCGACTATAAGTCGCCTCGAGATTTTGTTGGTCATGGTACACATACAGCCTCAACAGCAGTTGGGTCCGTAGTTAAAAATGTAAGCTCCTTTGGCTTTGGGCAAGGCACTGCTAGGGGTGGAGCGCCTAGGACTCGGCTAGCAGTGTACAAAGTATGTTGGAACGAAGGCCTAGAAGGAATATGCTCCGAAGCAGATATAATGGCAGGTTTTGATAACGCTTTGCATGATGGAGTTCATGTGATCTCAGCCTCATTTGGTGGAGGACCACCACTGAGGCCATTCTTTAAATCCCAGGCGGGTATCGGTTCCTTTCATGCAATGCAGTTGGGTGTTAGTGTGGTATTCTCAGCAGGTAACGATGGGCCTGCACCGTCTAGTGTTGGAAATGTTGCCCCATGGAGCATCTGTGTAGCTGCTTCAACTATTGATCGATCATTTCCGACCAAGATACTACTGGATAAGACCATTTCTGTCATGGGAGAAGGCTTTGTTACCAAAAAAGTTAAGGGGAAGTTGGCTCCTGCAAGGACCTTTTTTAGGGACGGGAACTGTTCTCCGGAGAATTCGCGAAATAAAACAGCAGAAGGGATGGTAATCCTATGCTTCTCCAACACTCCAAGCGACATTGGTTATGCAGAAGTTGCAGTGGTGAACATTGGTGCCTCCGGGTTGATCTATGCTTTGCCTGTGACTGATCAGATTGCCGAAACTGATATAATCCCCACTGTCCGCATCAACCAAAATCAAGGAACTAAACTCCGTCAATACATTGATAGTGCTCCAAAACCTGTGGTGATATCACCTAGTAAGACGACTATCGGAAAGTCACCGGCACCCACAATTGCACACTTCTCTTCTAGAGGGCCTAACACAGTTTCATCTGATATTCTCAAGCCAGACATAAGTGCTCCAGGAGCTAGTATAATGGCAGCATGGCCTCCTGTTACTCCTCCAGCTCCATCATCAAGTGACAAGCGGTCTGTGAACTGGAATTTTCTGTCCGGGACATCAATGGCGTGCCCTCATGTAACGGGAGTTGTTGCCCTTATCAAATCAGCCCACCCAGACTGGTCTCCTGCAGCCATTAAATCTGCTATCATGACTACCGCTTACAACAGGGATAGCACTCATGACAGTATTCTAGCCGGTGGATCAAGGAAAGTTGCAGATCCCTTTGACATTGGTGCTGGCCACTTAAATCCCTTGAAGGCAATGGATCCAGGGCTAGTTTATGACATGCAGGCAAGTGACTACATTGCCTACCTTTGCGATATTGGATACACCAGAGAACAAATAAAGGCCATTGTTCTTCCTGGAACCCATGTTAGCTGTTCAAAAGAAGACCAATCCATCTCAAACCTAAACTATCCTTCAATCACAGTTTCCAACCTCCAATCCACAGTGACGATCAAGAGGACTGTTCGTAATGTGGGACCCAAAAAAACAGCAGTTTACTTTGTTAGTATTGTGAATCCTTGTGGGGTTAAGGTATCAATCTGGCCAAGGATTCTATTTTTCTCATGCTTTAAGGAAGAACACACCTACTATGTGACTCTGAAACCACAGAAGAAGTCTCAAGGGAGGTATGACTTTGGGGAGATAGTGTGGACAGATGGGTTCCATTATGTGAGGAGTCCACTGGTGGTGTCTGTGAACAATGCTGGGGACTCTGATGATTCTCTATCTTACAGCATTTGA | 2319 | 45.36 | MASSFQCFWGLFFSLSIYFIQATPTSNVYIVYLGLNQSHDPLLTSKHHHQLLSNVFECEEAAKQSILYHYKHSFSGFAAKLNENQANILAKMEGVVSVFRSRTMKLHTTRSWDFMGLTLDESSEVTPLQLAYGDDIVVGVLDSGVWPESKSFQEESCLGPIPSCWKGKCVKGEMFDPKRDCNRKLIGAQYYHKGFEEEFGPVNPRTFDYKSPRDFVGHGTHTASTAVGSVVKNVSSFGFGQGTARGGAPRTRLAVYKVCWNEGLEGICSEADIMAGFDNALHDGVHVISASFGGGPPLRPFFKSQAGIGSFHAMQLGVSVVFSAGNDGPAPSSVGNVAPWSICVAASTIDRSFPTKILLDKTISVMGEGFVTKKVKGKLAPARTFFRDGNCSPENSRNKTAEGMVILCFSNTPSDIGYAEVAVVNIGASGLIYALPVTDQIAETDIIPTVRINQNQGTKLRQYIDSAPKPVVISPSKTTIGKSPAPTIAHFSSRGPNTVSSDILKPDISAPGASIMAAWPPVTPPAPSSSDKRSVNWNFLSGTSMACPHVTGVVALIKSAHPDWSPAAIKSAIMTTAYNRDSTHDSILAGGSRKVADPFDIGAGHLNPLKAMDPGLVYDMQASDYIAYLCDIGYTREQIKAIVLPGTHVSCSKEDQSISNLNYPSITVSNLQSTVTIKRTVRNVGPKKTAVYFVSIVNPCGVKVSIWPRILFFSCFKEEHTYYVTLKPQKKSQGRYDFGEIVWTDGFHYVRSPLVVSVNNAGDSDDSLSYSI* | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 344488 | 349182 | - | Vvi6g20 | Vvi6g20 | 787597 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi6g20 | 772 | Gene3D | - | 350 | 481 | - | - | |
Vvi6g20 | 772 | Gene3D | Peptidase S8/S53 domain | 135 | 625 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g20 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 18 | 107 | IPR037045 | - | |
Vvi6g20 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 111 | 612 | - | - | |
Vvi6g20 | 772 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT3.18 | 22 | 754 | - | - | |
Vvi6g20 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 133 | 152 | IPR015500 | - | |
Vvi6g20 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 214 | 227 | IPR015500 | - | |
Vvi6g20 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 541 | 557 | IPR015500 | - | |
Vvi6g20 | 772 | CDD | Peptidases_S8_3 | 105 | 578 | IPR034197 | - | |
Vvi6g20 | 772 | CDD | PA_subtilisin_like | 388 | 472 | - | - | |
Vvi6g20 | 772 | Pfam | Fibronectin type-III domain | 660 | 756 | IPR041469 | - | |
Vvi6g20 | 772 | Pfam | Subtilase family | 133 | 581 | IPR000209 | GO:0006508|GO:0008236 | |
Vvi6g20 | 772 | SUPERFAMILY | Subtilisin-like | 106 | 616 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g20 | 772 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 22 | 754 | IPR045051 | - | |
Vvi6g20 | 772 | Pfam | Peptidase inhibitor I9 | 28 | 107 | IPR010259 | - | |
Vvi6g20 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 542 | 552 | IPR023828 | - | |
Vvi6g20 | 772 | Gene3D | - | 629 | 759 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi6g20 | - | - | vvi:100265607 | 1573.14 |