Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g203 ATGGGGCCTATGTCTCGGAATGAGATTATAATGGCGGTGACTCTGCTTCTCACGGTGGGGCTGTGGATTTTTGGAGGTGTGCTGAATGTTGATGCTGTTACTGCTGCAATTCTGGGGTTATCTGTCCTCCTTGTGACTGGGGTTGTGACATGGAAGGAGTGCTTAGCAGAATCAGTTGCCTGGGATACCCTCACATGGTTTGCTGCACTTATCGCAATGGCAGGGTATCTTAACAAATACGGTCTCATCTCCTGGTTCAGCCAAACTGTAGTAAAGTTTGTTGGCGGATTGGGTCTTTCATGGCAGCTATCTTTCAGCATTCTGCTTCTGCTCTATTTCTACTCTCACTATTTCTTTGCAAGTGGAGCTGCTCATATAGGTGCCATGTTCACAGCCTTCTTATCAGTTGCTAGTGCCCTAGGCACTCCTCCATATTTTGGAGCCATGGTGCTGGCCTTCCTTTCCAACCTCATGGGTGGCCTCACCCACTATGGCATTGGATCAGCACCCATTTTCTATGGTGCCAACTACGTATCCCTGGCCAAATGGTGGGGTTATGGATTCCTCATATCCATCGTTAATATTGTTATCTGGCTTGGAGTTGGTGGGGTGTGGTGGAAGGCCATTGGCTTGTGGTAA 639 48.36 MGPMSRNEIIMAVTLLLTVGLWIFGGVLNVDAVTAAILGLSVLLVTGVVTWKECLAESVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFSILLLLYFYSHYFFASGAAHIGAMFTAFLSVASALGTPPYFGAMVLAFLSNLMGGLTHYGIGSAPIFYGANYVSLAKWWGYGFLISIVNIVIWLGVGGVWWKAIGLW* 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2581376 2586304 + Vvi6g203 Vvi6g203 787780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g203 212 Pfam Sodium:sulfate symporter transmembrane region 1 212 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vvi6g203 212 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 1 212 IPR030676 -
Vvi6g203 212 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 1 212 - -
Vvi6g203 212 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 1 206 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g203 - - vvi:100253664 401.749