Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g227 ATGAGCAGTGGAGTGGTGTGTGTGACAGGGGCATCAGGATACATAGCTTCATGGCTTGTGAAGCTTCTTCTCCAACGTGGTTACACTGTCAAAGCCTCTGTTCGTGATCCAAATGATCCAAAGAAGACAGAACATTTACTTTCCCTTGATGGTGCAAAAGAGAGACTTCACTTGTTCAAAGCAAACTTACTGGAAGAAGGTTCCTTTGATTCTATAGTGGAAGGGTGTGTTGGTGTTTTTCATACAGCCTCACCCTTTTTTCATGCAGTCACAGATCCACAGGCAGAATTAATTGATCCAGCTGTGAAGGGAACACTTAATGTCCTTGGTTCATGTGCGAAAGCCTCATCTGTGAAGAGAGTGGTTGTAACATCTTCTATAGCTGCAGTTGCATACAATAGAAACCCCAGAACTCCTGATGTTGTGGTTGATGAGACTTGGTTTACAGATCCAGACTTTTGTAAGGGGCTACAGCTTTGGTACGTGGTCTCAAAGACTTTGGCTGAGGATGCTGCATGGAAATTTGCAAAAGAGAAGGGTATTGACATGGTCACTATAAACCCAGCAATGGTGATTGGTCCTCTTTTACAGCCAACACTTAATACAAGTGCTGCTGCAATTTTGAATCTCATAAATGGAGGACAAACATTTCCCAATGCATCCTTTGGATGGGTTAATGTTAAAGATGTAGCTGAGGCACATATTCAAGCATTTGAGGTTCCTTCAGCTAGTGGAAGATATTGTTTGGTTGAGAGAGTTGTCCACTACTCAGAGCTTGTGAAGATTTTGAAAGAGCTTTTTCCTGATTTTCAACTCCCTGAGAAGTGTGCAGATGACAAACCTTTTGTGCCGACCTTCCAGGTGTCCAAAGAAAAGGCAAAAAGCTTGGGCATTGAGTTCATTCCCTTGGAGGTGAGCCTCAAGGAAACTGTGGAAAGCTTGAAGGAGAAGGAGTTTTTCAGTCCCTGA 969 43.14 MSSGVVCVTGASGYIASWLVKLLLQRGYTVKASVRDPNDPKKTEHLLSLDGAKERLHLFKANLLEEGSFDSIVEGCVGVFHTASPFFHAVTDPQAELIDPAVKGTLNVLGSCAKASSVKRVVVTSSIAAVAYNRNPRTPDVVVDETWFTDPDFCKGLQLWYVVSKTLAEDAAWKFAKEKGIDMVTINPAMVIGPLLQPTLNTSAAAILNLINGGQTFPNASFGWVNVKDVAEAHIQAFEVPSASGRYCLVERVVHYSELVKILKELFPDFQLPEKCADDKPFVPTFQVSKEKAKSLGIEFIPLEVSLKETVESLKEKEFFSP* 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2818631 2825226 - Vvi6g227 Vvi6g227 787804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g227 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 320 - -
Vvi6g227 322 Gene3D - 5 321 - -
Vvi6g227 322 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 5 320 - -
Vvi6g227 322 CDD FR_SDR_e 6 297 - -
Vvi6g227 322 Pfam NAD dependent epimerase/dehydratase family 6 242 IPR001509 -
Vvi6g227 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 315 IPR036291 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g227 - - vvi:100255334 644.425