Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g290 ATGGCTGGGGCAACCGGAGGAAGGTCGCTGGAGCAGACGCCGACATGGGCTGTTGCTGTAGTTTGTTTTGTTTTGGTGTTGATTTCTATTATCATTGAGTACATCATTCATCTCACTGGAAAGTGGTTGAAGAAGAAACACAAGAGAGCTCTATATGAAGCGCTGGAAAAGGTCAAATCAGAGCTAATGTTGCTAGGGTTCATATCCTTGCTCCTAACAGTAGGACAAGGTCTGATATCGACTATATGTATATCAAAGAGTGTTGCAGCAACTTGGCATCCATGCAGCAAGTCTGAAGAAGAGAAGAGCACAACGACTGAAGAATCAGACACCGAATCCGATAATAGACGAAAACTTCTCAGCATATCGGGTTTTGGTGGAGGCAGCCGACGCGTTTTGGCGGCAGCTGGAGAAGACAAATGTTCAGCTAAGGGTCAAGCCCCATTTGTGTCGTCGGATGCTATTCACCAACTGCACATATTCATCTTCGTACTGGCCATTTTCCATGTCCTTTACTGCATCTTAACCCTGGCTTTGGGCACAGCTAAGATGAGAAGGTGGAAGGCATGGGAAAAGGAAACAAGAACAGTCGAGTACCAGTTCTCCCACGATCCGGAGAGGTTCAGGTTTGCCAGGGAGACGTCTTTTGGAAGAAGGCACTTGAGTTTCTGGACCAATACACCCTTTCTCATCTGGATAGTATGTTTCTTCAGACAGTTCGTTAGGTCCGTTCCAAAAGTTGACTACTTCACCTTAAGACATGGATTTATCATGGCACATTTGGCACCTCAAAGCCATGCAAAATTTGATTTCCAAAAATATATCAATAGATCGCTGGAGGAGGATTTCAAGGTGGTTGTGGGTATCAGTCCACCAATATGGTTCTTTGCCGTGCTATTCCTTCTCCTCAACACTCATGGCTGGTACTCTTATCTATGGCTGCCATTCATCCCACTGATTGTTATCCTATTGGTGGGAACCAAGTTACAGGTGATCATAACCAAGATGGGGCTTAGAATTCAAGAAAGGGGAGAGGTTGTGAAGGGAGTGCCGGTTGTTCAGCTTGGTGATGACCTCTTCTGGTTCAATCGCCCTCGCCTCGTTCTCTACCTCATCCATTTTGTGCTCTTTCAGAACGCATTTCAGCTGGCTTTCTTCGCATGGACTTGGTATGAATTCGGGTTTAAGTCTTGTTTCTATGCACACACTGAAGATGTGGTGATCAGGATTTCCATGGGGGTCATCATACAGATTCTTTGCAGCTACGTAACTCTCCCGCTCTATGCCCTGGTGACACAGATGGGTTCAACCATGAAGCCAACGATCTTCCATGAGAGAGTAGCCACGGCTCTAAGGAACTGGCACCACACGGCTAAGAAAAACATCAAACACAACAAGCATTCTGGGCTAGCCACACCCATGTCAAGTAGGCCAACAACGCCTTCCCGCGGCACGTCCCCTGCTTACCTCTTGCGCTACTACCGGAGCGACATGGACAGCCTCCAAGCATCCCCGAGAAGGTCCAACTTGGACATGGAGCATTGGGAGACTGATGGGTCCCCCTCCCCCTCGCACCCGCACCATGGTGACGGCTCATCCTCTCACCACAACCAGCTCCACCAAGGAACGTCCTTGGAACATGATAGAGACATCAGCGCGCCTAGCTCCTCCCAAGTGGTTCCTCTTCCACAACCCACTCTCCACCAACACGAAATCGATGTTATTCTCAAATACCCTTGGAAGTTCCACTTAATTACACTTCTACACTCCACATCGATGGCGAGAGGCTCTTCTCAGTCGCAGGCGTCGACGACCGCCACCTCCCGGCCCGGCCCTGTCGGCATGGCTCCGCGGGGGACGGCGGCCGCCACTGCAGGGATGCGTCGCCGACGTGTTGGAGGCGGTAGCGGAGGCTCATCCAGCGGATACGGTGGCGGCGGCAGCGGAAGCAATATGCTGAGATTCTACACCGACGACGCTCCTGGACTCAAGATCACGCCTACCGTCGTCCTCGTTATGAGTCTCTGCTTCATCGGCTTCGTCACTGCTCTCCACGTCTTCGGCAAGATTTATCGCTACAAAGCTGGTGGCGGACCTTGA 2100 50.48 MAGATGGRSLEQTPTWAVAVVCFVLVLISIIIEYIIHLTGKWLKKKHKRALYEALEKVKSELMLLGFISLLLTVGQGLISTICISKSVAATWHPCSKSEEEKSTTTEESDTESDNRRKLLSISGFGGGSRRVLAAAGEDKCSAKGQAPFVSSDAIHQLHIFIFVLAIFHVLYCILTLALGTAKMRRWKAWEKETRTVEYQFSHDPERFRFARETSFGRRHLSFWTNTPFLIWIVCFFRQFVRSVPKVDYFTLRHGFIMAHLAPQSHAKFDFQKYINRSLEEDFKVVVGISPPIWFFAVLFLLLNTHGWYSYLWLPFIPLIVILLVGTKLQVIITKMGLRIQERGEVVKGVPVVQLGDDLFWFNRPRLVLYLIHFVLFQNAFQLAFFAWTWYEFGFKSCFYAHTEDVVIRISMGVIIQILCSYVTLPLYALVTQMGSTMKPTIFHERVATALRNWHHTAKKNIKHNKHSGLATPMSSRPTTPSRGTSPAYLLRYYRSDMDSLQASPRRSNLDMEHWETDGSPSPSHPHHGDGSSSHHNQLHQGTSLEHDRDISAPSSSQVVPLPQPTLHQHEIDVILKYPWKFHLITLLHSTSMARGSSQSQASTTATSRPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRYKAGGGP* 700
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3838839 3845837 - Vvi6g290 Vvi6g290 787867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g290 699 MobiDBLite consensus disorder prediction 97 116 - -
Vvi6g290 699 MobiDBLite consensus disorder prediction 595 610 - -
Vvi6g290 699 MobiDBLite consensus disorder prediction 468 485 - -
Vvi6g290 699 MobiDBLite consensus disorder prediction 512 534 - -
Vvi6g290 699 MobiDBLite consensus disorder prediction 465 485 - -
Vvi6g290 699 PANTHER MLO-LIKE PROTEIN 1 1 551 IPR004326 GO:0006952|GO:0016021
Vvi6g290 699 PANTHER MLO-LIKE PROTEIN 1 551 - -
Vvi6g290 699 Pfam Mlo family 8 494 IPR004326 GO:0006952|GO:0016021
Vvi6g290 699 MobiDBLite consensus disorder prediction 512 564 - -
Vvi6g290 699 MobiDBLite consensus disorder prediction 548 564 - -
Vvi6g290 699 MobiDBLite consensus disorder prediction 595 645 - -
Vvi6g290 699 Pfam Sec61beta family 648 688 IPR016482 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g290 Vvi8g592 ECH
Vvi6g290 Vvi13g491 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g290 K08472 - vvi:100233065 1098.96