Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g292 ATGGCTGCTGGAGATGGAGTTTCTCGCTCTTTGCAGGAAACGCCCTCTTGGGCTCTGGCGACTGTTTGCTTCATCTTCATCTCCCTCTCTATTTTTATTGAACACTTGATCCATCTCCTTGCCAACTGGCTCCGGCGGCATAAAAAGACTGCCTTGTTAGAGGCTGTGGAGAAGCTCAAATCAGTGCTTATGCTCTTGGGGTTCATGTCCCTAATATTAGCAGTAACCCAAAAGTTTATTTCCAAAATATGCATACCCAATAACGCGGCATACACCATGCTCCCATGTCGAAAAATCATAAAAATCAAAACCACAAAGGCTCTAGGACATATGCAGATTTGGACCCACACATTTCAAAACTGGTTATCCTCAGAAAGTAGTGTGTCTCAAGAAAGAAGATCGGCAGCCCAAAGCAGTGAATCTTCTGATTATTGCAGTTCCAAGGATATGACTTCTCTTATATCACCAGAAGGGATGAATCAGCTCAGTATCTTCATCTTTGTCTTAGCAGTTATGCAGATTGTATACAGTGTTCTCACAATGGCTTTAGGAAGGGCCAAGATGAGGAGATGGAAAGCTTGGGAGAAAGAAACTCAAACGATAGAGTACCAGGCTGCTAATGATCCTAATCGGTTTAGATATACAAGACAAACGACGTTTGGGCGTAGGCACATGACTAATTGCACTGAAACACCACTTCATTTATGGACGAAATGTTTCTTCAGGCAATTCTTCCATTCTGTGGCAAAGGTTGACTACCTCACTCTTCGCCATGGCTTCATTGCGGCCCATCTGTCAATAAATAACAAGACTTTCAATTTCCAGAAGTACATACAACGGTCCTTGGAGGATGATTTCAAGGTTGTAGTAGGCATCAGCCCTGTGATGTGGTTTATAGTTGTAATCTTCATCCTCCTTGACGTTCATGGTTGGCATGCATACTTGTCACTTTCATTTCTCCCACTACTTATAGTGCTAGTTCTTGGAACCAAACTTGAAGTGATTGTTGCAAGAATGGCTCTGAAACTCAAAGATAAGAACAGTACAATCAAAGGAACGCCTCTGGTTCAGCCCAATGACGACCTCTTCTGGTTCAGTCACCCCAAGTTTGTCTTGACCCTTCTACATTTGACCCTATTTATGAATGCATTTGAGCTTGCTTTCTTTGTTTGGGTCACGTTGACATTTGGGTTAAAGTCTTGTTACCATGAAAGGATAGAGACCATCATCATTAGGGTGGTTCTAGCGGTGACAGTTCAAGTCCTTTGCAGTTACATCACCCTTCCTCTCTATGCTCTTGTAACACAGATGGGTACAAATTTTAAGAGTGCCGTGCTAGAAGAGCAAACAGCTAATGTCATAAGGCAATGGCATGCCACAGTGAAGCAAAAGAGGAAAAAACAAAAAGATCATTCACAGTCTCTTCACGATTATTCAACTACTACATGGGGCAGTAGCAGAACCAGTCCCCATGATCTCTCTCCTCATCGTCGATCACCAAACTTCAGTACTGAAATCACAGCTATTGGCACTGAAAGCGAAATCATACCAGACCATCAACAAGAAATAGTTGTCCAAGATGAACATACCCCAGCTGATCATACAGTTTCATCCATTGCAGTACAAATAGAAATGCCAGAGATTTCTATATCCCGAACTTAA 1662 42.42 MAAGDGVSRSLQETPSWALATVCFIFISLSIFIEHLIHLLANWLRRHKKTALLEAVEKLKSVLMLLGFMSLILAVTQKFISKICIPNNAAYTMLPCRKIIKIKTTKALGHMQIWTHTFQNWLSSESSVSQERRSAAQSSESSDYCSSKDMTSLISPEGMNQLSIFIFVLAVMQIVYSVLTMALGRAKMRRWKAWEKETQTIEYQAANDPNRFRYTRQTTFGRRHMTNCTETPLHLWTKCFFRQFFHSVAKVDYLTLRHGFIAAHLSINNKTFNFQKYIQRSLEDDFKVVVGISPVMWFIVVIFILLDVHGWHAYLSLSFLPLLIVLVLGTKLEVIVARMALKLKDKNSTIKGTPLVQPNDDLFWFSHPKFVLTLLHLTLFMNAFELAFFVWVTLTFGLKSCYHERIETIIIRVVLAVTVQVLCSYITLPLYALVTQMGTNFKSAVLEEQTANVIRQWHATVKQKRKKQKDHSQSLHDYSTTTWGSSRTSPHDLSPHRRSPNFSTEITAIGTESEIIPDHQQEIVVQDEHTPADHTVSSIAVQIEMPEISISRT* 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3864899 3870086 + Vvi6g292 Vvi6g292 787869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g292 553 MobiDBLite consensus disorder prediction 463 501 - -
Vvi6g292 553 Pfam Mlo family 9 490 IPR004326 GO:0006952|GO:0016021
Vvi6g292 553 PANTHER MLO-LIKE PROTEIN 1 2 531 IPR004326 GO:0006952|GO:0016021
Vvi6g292 553 PANTHER MLO-LIKE PROTEIN 2 531 - -
Vvi6g292 553 MobiDBLite consensus disorder prediction 475 501 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g292 Vvi13g490 ECH
Vvi6g292 Vvi8g593 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g292 K08472 - vvi:100233064 1057.74