Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g303 ATGATTACTGCTGGTATCTCCAAGGATGGACAAACCCGTGAGCATGCACTACTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGATGCCACAACACCCAAGTACTCCAAGGCAAGGTACGATGAAATCGTGAAGGAAGGCCCAACTCTTCTTGAGGCCCTGGACATGATCAATGACCCGGTATGGTGGTGA 210 49.05 MITAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEGPTLLEALDMINDPVWW* 70
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 3984761 3985627 - Vvi6g303 Vvi6g303 787880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g303 69 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 3 52 - -
Vvi6g303 69 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 59 IPR027417 -
Vvi6g303 69 PANTHER TRANSLATION FACTOR 3 52 - -
Vvi6g303 69 Gene3D - 1 67 IPR027417 -
Vvi6g303 69 Pfam Elongation factor Tu GTP binding domain 8 53 IPR000795 GO:0003924|GO:0005525
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g303 Vvi8g604 ECH
Vvi6g303 Vvi13g476 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g303 K03231 - vvi:100256979 111.694