Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g306 ATGAACAAGCGGTCCTTCAAGTATGCCTGGGTGTTGGACAAACTGAAGGCTGAGCGTGAACCCGGTATCTCCAAGGATGGACAAACCCGTGAGCATGCACTGCTTGCTTTCACCCTTGGTGTGAAGCAGATGATTTGCTGCTGTAACAAGATGGATGCCACAACACCAAAGTACTCCAAGGCAAGGGCGACAATATGA 198 50.0 MNKRSFKYAWVLDKLKAEREPGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARATI* 66
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4013051 4013794 + Vvi6g306 Vvi6g306 787883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g306 65 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 20 63 - -
Vvi6g306 65 PANTHER ELONGATION FACTOR 1-ALPHA 1-RELATED 1 23 - -
Vvi6g306 65 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 60 IPR027417 -
Vvi6g306 65 Gene3D - 3 65 IPR027417 -
Vvi6g306 65 PANTHER TRANSLATION FACTOR 1 23 - -
Vvi6g306 65 PANTHER TRANSLATION FACTOR 20 63 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g306 Vvi13g476 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g306 K03231 - aof:109848017 99.7525