Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g350 ATGGCTGTCACTGCTGAAGAGGTTCTTCCCCCTTCTCTCGATTCCACTTCTGAACCACCCCCTCTTTTTGATGGAACCACCAGGTTGTATACTTCTTACATATGCCCATATGCACAGCGTGTCTGGATTGCTCGAAACTATAAGGGATTGCAGGACAAGATCAAATTAGTTCCTATTGATCTTGGGAATAGACCTGCTTGGTATAAGGAGAAAGTCTATCCAGAAAATAAGGTGCCTTCATTGGAGCATAATAATAAAGTCACAGGAGAAAGTCTTGATTTGATTAAATATATTGATAGCCACTTTGAAGGACCCTCCCTTTACCCCGATGATCCCAACAAGAGACAGTTTGCGGAAGAGCTGCTATCCTACACTTACACCTTCAATAGAGCTGTGATATTTTCCCTCAAGGGAGATTCACAAAATGAAATTAATGCTGCTTTTGATTACCTAGAAACAGCTCTTTCAAAATTCAATGATGGGCCTTTCTTCCTTGGCCAATTCAGTCTGGTGGATATAGCATTTGCACCATTCATTGAACGATTTCATCCTCTACTACTAGATGTAAAGAAGTGTGACATCACCTCAGGAAGGCCAAAGCTGGTATCATGGATTGAGGAGATGAACAAAATCGAGGCCTACAAACAAACAAAACGTGATCCTCAGGAGCTTGTTGATGCCCTCAAGAAGCGCTTTATGGCAAACTGA 708 41.95 MAVTAEEVLPPSLDSTSEPPPLFDGTTRLYTSYICPYAQRVWIARNYKGLQDKIKLVPIDLGNRPAWYKEKVYPENKVPSLEHNNKVTGESLDLIKYIDSHFEGPSLYPDDPNKRQFAEELLSYTYTFNRAVIFSLKGDSQNEINAAFDYLETALSKFNDGPFFLGQFSLVDIAFAPFIERFHPLLLDVKKCDITSGRPKLVSWIEEMNKIEAYKQTKRDPQELVDALKKRFMAN* 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4646394 4653263 - Vvi6g350 Vvi6g350 787927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g350 235 Gene3D - 104 235 - -
Vvi6g350 235 PRINTS Omega-class glutathione S-transferase signature 25 40 IPR005442 GO:0004364|GO:0005737
Vvi6g350 235 PRINTS Omega-class glutathione S-transferase signature 102 116 IPR005442 GO:0004364|GO:0005737
Vvi6g350 235 PRINTS Omega-class glutathione S-transferase signature 162 181 IPR005442 GO:0004364|GO:0005737
Vvi6g350 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 25 106 IPR004045 -
Vvi6g350 235 SUPERFAMILY Thioredoxin-like 19 107 IPR036249 -
Vvi6g350 235 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 84 232 IPR010987 -
Vvi6g350 235 Gene3D Glutaredoxin 1 103 - -
Vvi6g350 235 PANTHER - 2 234 - -
Vvi6g350 235 SUPERFAMILY GST C-terminal domain-like 102 232 IPR036282 -
Vvi6g350 235 PANTHER GLUTATHIONE S-TRANSFERASE L1 2 234 IPR044629 GO:0004364
Vvi6g350 235 SFLD Main (cytGST) 28 210 - -
Vvi6g350 235 SFLD Glutathione Transferase (cytosolic) 28 210 IPR040079 -
Vvi6g350 235 MobiDBLite consensus disorder prediction 1 21 - -
Vvi6g350 235 CDD GST_C_Lambda 111 229 - -
Vvi6g350 235 Pfam Glutathione S-transferase, C-terminal domain 141 206 - -
Vvi6g350 235 Pfam Glutathione S-transferase, N-terminal domain 29 105 IPR004045 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g350 Vvi8g665 ECH
Vvi6g350 Vvi13g202 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g350 K00799 - vvi:100853342 478.404