Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g368 ATGGGTTGTGGGAAAATTGGATTATTGGTCATCTGGGTTTCATCAGTATTGTGTTTGGCATGCTGTAGTGGGTCTCAGGATGATTATCTTATCGATTGTGGATCAACCACCAATACTTCGGTGGCTGGTCGCGTTTTTCTTGCTGATACCTCGAGTTACCTTTCCACACCTGAAAAACTTTTGGCCAATACTGCCACGAAATCTGACTCATCCTCTGATGATTTGCCGCTCTACCAGACGGCAAGGATCTTTACTGGAACCTCTAAGTACACGTTTTCGGTCGGGAGCAATAGGCGATACTGGATCCGCCTTTATTTCTTCCCATTTGTTTATGATACCTATAACATGAGCACTGCTAATTTCTCTGTTTCCACCCAAAATCATGTCCTTATAAGCAACTTCAGTCCGAAGGCTGGTTCTGCTATGAAGGAATTCTCTGAAAATGTGACTTCAGATACCCTTGTTATTACCTTCGCTCCTTCCAGCAATTCATTTGCTTTCTTGAATGCCTTAGAAGTTGTTTCTGTACCAAATGAGCTGATTAGTGATGATGCCATCACCATCACGCCGTCAGGGAAGTTCAAGGGTCTTGTGACACAGGCCCTGGAGACGGTTGCAAGGGTGAATATGGGAGGACCAACGGTCACCTCTGAGAACGATACCCTTTGGCGAACTTGGCTTCCTGATCAGAATTTCTTGGTAGAGAATAATCTTGCAACCAATGTATCAAAAATTGGAGCTGTCATATATGCGAAAGGGGGGCCTACAAAGCTTATTGCTCCGGCTTCTGTCTATGGTACTGCCACTAAGATGAACTCAGATGCTAATCCTCAGTACAATTTCAACGTGACATGGGAGTTCGATGTGGATCCAGGGTTTCAGTACCTTGTTCGGTATCACTTTTGTGATATCGTGAGTATATCTCTCAACCAGCTATACTTCAATGTTTATCTGGACTCCTACCTTGTCTATGAGGAGCTGGATCTCAGTACTTTGGCATTTAACATTTTAGGTGCTCCATATTATTTAGACGTTGTCACAGGAACAAGGGTTGGCAGCAAGCTTCGTGTAAGTATTGGACCGTCTTCCATACATACTGAGTATCCTGATGCCATTCTAAATGGGTTGGAGATCATGAAAATGAACAGTTCTATGGGCAGCCTTAGTGGATCTGTGATTGTCTCAAACCCAAGCTCAAAAAAGAATGTTGCAGTGGTAATTGGCGCAAGTGTTGGGGTGTTTGCTGCATTGATATTGGCTGGTGTTTTCTTTCTGGTGTACAGAAGAAGAAGAAAACTGGCACGTCAAGGCCATTCAAAGACATGGATGGCTTTCTCCACTAATGGAGGGAATTCTCACACGATGGGAAGTAAATACTCTAATGGAACAATTGCAAGTGCTGGTTCTAACTTTGGGTATCGAATTCCCTTTCTGGCAGTTCAAGAGGCTACAAACAACTTTGATGAGAGTTGGGTTATTGGAATTGGTGGTTTTGGAAAAGTTTACAAGGGGACTTTAAATGATGTTTCATTAATTGGGTATTGTGATGAAAAAAATGAGATGATTTTGATATATGAATATATGGAGAATGGAACCGTCAAGAGCCATCTCTATGGCTCGGGTCTTCCCAGTTTGGATTGGAAGGAGAGGCTTGAGATATGCATCGGGGCTGCCAGAGGACTTCACTACCTTCACACTGGCTATGCAAAAGCAGTTATTCATCGTGATGTAAAGTCTGCAAATATCTTGCTTGATGAGAATCTTATGGCTAAAGTCGCTGATTTTGGGCTTTCAAAAACTGGACCTGAGATTGATCAGACCCATGTTAGTACGGCTGTGAAAGGGAGTTTTGGGTACCTTGATCCTGAATATTTCAGGAGGCAACAGTTGACAGAGAAATCTGATGTGTATTCATTTGGGGTGGTTTTGTTTGAAGTACTTTGTGCAAGACCTGTTATTGATCCAACCCTTCCAAGGGAAATGGTGAACTTAGCTGAGTGGGCAATGAAGTGGCAGAAGAGAGGCCAGTTGGAACAGATCATAGACCCTAACCTTGTGGGAAAAATCAGACCAGATTCCCTCAGAAAGTTTGGAGAAACGGCTGAGAAATGCTTGTCTGACTTTGGTGTTGACAGGCCTTCCATGGGTGACATCTTGTGGAATCTGGAGTATGCGCTTCAACTTCAAGAAGCAGTTCTTGAACGCCGCGTCAGACTCCGGCCACTTGTATACGTTGAGATAGGTGGCTCGAACTGGGTTTCGAGCATCGGTGCCGCACCTGGATATGCAGGTGGAGGACATAGTTTCCGGCGAGTGGGTCAGACTCCGGGATGGGTTCTGCTCTGTTGGCAGAAAGTTGAAACAGAGCTTATTCTGAAAGAAAAGTGTGCATACTAG 2397 44.1 MGCGKIGLLVIWVSSVLCLACCSGSQDDYLIDCGSTTNTSVAGRVFLADTSSYLSTPEKLLANTATKSDSSSDDLPLYQTARIFTGTSKYTFSVGSNRRYWIRLYFFPFVYDTYNMSTANFSVSTQNHVLISNFSPKAGSAMKEFSENVTSDTLVITFAPSSNSFAFLNALEVVSVPNELISDDAITITPSGKFKGLVTQALETVARVNMGGPTVTSENDTLWRTWLPDQNFLVENNLATNVSKIGAVIYAKGGPTKLIAPASVYGTATKMNSDANPQYNFNVTWEFDVDPGFQYLVRYHFCDIVSISLNQLYFNVYLDSYLVYEELDLSTLAFNILGAPYYLDVVTGTRVGSKLRVSIGPSSIHTEYPDAILNGLEIMKMNSSMGSLSGSVIVSNPSSKKNVAVVIGASVGVFAALILAGVFFLVYRRRRKLARQGHSKTWMAFSTNGGNSHTMGSKYSNGTIASAGSNFGYRIPFLAVQEATNNFDESWVIGIGGFGKVYKGTLNDVSLIGYCDEKNEMILIYEYMENGTVKSHLYGSGLPSLDWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKRGQLEQIIDPNLVGKIRPDSLRKFGETAEKCLSDFGVDRPSMGDILWNLEYALQLQEAVLERRVRLRPLVYVEIGGSNWVSSIGAAPGYAGGGHSFRRVGQTPGWVLLCWQKVETELILKEKCAY* 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4838276 4845016 - Vvi6g368 Vvi6g368 787945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g368 798 Pfam Malectin-like domain 31 381 IPR024788 -
Vvi6g368 798 PANTHER OS07G0166700 PROTEIN 26 509 IPR045272 GO:0004714|GO:0006468
Vvi6g368 798 PANTHER OS07G0166700 PROTEIN 509 735 IPR045272 GO:0004714|GO:0006468
Vvi6g368 798 Pfam Protein tyrosine and serine/threonine kinase 509 649 IPR001245 GO:0004672|GO:0006468
Vvi6g368 798 Gene3D - 200 383 - -
Vvi6g368 798 Gene3D - 28 177 - -
Vvi6g368 798 CDD TM_EGFR-like 406 436 - -
Vvi6g368 798 ProSiteProfiles Protein kinase domain profile. 427 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g368 798 Gene3D Transferase(Phosphotransferase) domain 1 529 739 - -
Vvi6g368 798 Gene3D Phosphorylase Kinase; domain 1 466 507 - -
Vvi6g368 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Vvi6g368 798 SMART serkin_6 487 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi6g368 798 Gene3D Phosphorylase Kinase; domain 1 508 528 - -
Vvi6g368 798 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 509 735 - -
Vvi6g368 798 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 26 509 - -
Vvi6g368 798 SUPERFAMILY Protein kinase-like (PK-like) 467 723 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g368 Vvi13g216 ECH
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76704 PF12819 Malectin_like 3.00E-41 CL0202 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g368 - - vvi:100251868 1441.02