Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g478 ATGGGCTGGCCTTATATCGGGGAGACGCTCAAGCTCTATACTGAGAACCCAAATTCCTTTTTCTCCAACAGGCAAAAACGACATGGAGATGTTTTCAAGACCAGCATACTGGGATGTCCTTGTGTGATGGTTTCAAGCCCGGAAGCTATTAAGGTTGTGCTAGTGACTCGAGCTCATCTCTTTAAGCCAACCTATCCATCAAGCAAAGAGAGAATGATAGGGCCAGAGGCTATCTTCTTTCATGAAGGGCCCTATCATTCAAGGCTCAAGAAATTGGTCCAGGCCTCTTTTCTCCCCTCTGCAATTAGAGGATCGGTCTCAGCGATAGAGCAGATTGTTCTCAAATTTCTTCCTACCTGGAACAACGGTGTCGTTAACACTCTGCAAGAGATGAAAAAATATACTTTTGATGTGGCCATCCTTTCGGCATTCGGGCACAAACTCGACTTAGAGATGGAGGGAATCAAACATCTGTATCGGAGTCTTGAGAAGGGCTATAATTCCATGCCTATAAATCTTCCAGGAACTCCCTTCCGCAGAGCCATGAAGGCGAGGCAGCTTCTCAACGAGACTTTCAGGAGATTGATAGCAAAGAGAAGGGGAAGTAGTAAACAAGGAGGTGGATTGCTGGGAATTCTTCTGGGAGCTAAGGACCAGCATCTGAATCACCTGAGCGATTCTCAAATTGCTGATAACATCATCGGAGTCATCTTTGCTGCTCATGATACCACTGCAAGTGTTCTCACATGGCTTCTCAAGTACCTACATGATAATAGAGATCTCCTCGAAGCCGTTACCAGGGAACAAGAAGGCATTAAAGCCAGCATATCAGAAGCAAATCGAGGCCTTACGTGGGATGATACTCGGCGCATGCCGCTGACCGGCCGGGTGATTCAGGAGACTTTAAGAACGGCAAGCATTCTCTCCTTCACATTCAGAGAAGCAGTCGAAGACGTAGAATTTGAAGGGTACTACATCCCCAAAGGCTGGAAGGTTCTTCCACTATTCAGAAGCATCCATTACTGTGCTGATTTCTTCCCTCAACCCGAAAAGTTTGACCCTTCGAGATTCGAGGTGCCACCAAAACCCAACACGTTCTTGCCATTTGGGAATGGCGTGCATGCCTGTCCAGGCAGTGAGCTAGCCAAGCTTGAGATGTTCGTCCTCCTCCACCACCTCACCACCTCCTACAGGTGGAAGGTGGTGGGAGGTGAAGATGGCATACAATACGTCCCATTTCCGGTGCCCCAGCGCGGCCTGCCAATAGAGGTGACCCCAAGAAAAGCAAACGCAGAATAA 1299 48.11 MGWPYIGETLKLYTENPNSFFSNRQKRHGDVFKTSILGCPCVMVSSPEAIKVVLVTRAHLFKPTYPSSKERMIGPEAIFFHEGPYHSRLKKLVQASFLPSAIRGSVSAIEQIVLKFLPTWNNGVVNTLQEMKKYTFDVAILSAFGHKLDLEMEGIKHLYRSLEKGYNSMPINLPGTPFRRAMKARQLLNETFRRLIAKRRGSSKQGGGLLGILLGAKDQHLNHLSDSQIADNIIGVIFAAHDTTASVLTWLLKYLHDNRDLLEAVTREQEGIKASISEANRGLTWDDTRRMPLTGRVIQETLRTASILSFTFREAVEDVEFEGYYIPKGWKVLPLFRSIHYCADFFPQPEKFDPSRFEVPPKPNTFLPFGNGVHACPGSELAKLEMFVLLHHLTTSYRWKVVGGEDGIQYVPFPVPQRGLPIEVTPRKANAE* 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5973295 5977279 - Vvi6g478 Vvi6g478 788055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g478 432 Pfam Cytochrome P450 3 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Vvi6g478 432 PRINTS E-class P450 group I signature 25 44 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS E-class P450 group I signature 228 245 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS E-class P450 group I signature 248 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS E-class P450 group I signature 295 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS E-class P450 group I signature 335 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PANTHER ABSCISIC ACID 8'-HYDROXYLASE 2 1 425 - -
Vvi6g478 432 PANTHER CYTOCHROME P450 26 1 425 - -
Vvi6g478 432 Gene3D Cytochrome P450 1 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS P450 superfamily signature 239 256 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS P450 superfamily signature 296 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g478 432 SUPERFAMILY Cytochrome P450 2 427 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g478 K09843 - vvi:100260462 857.825