Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g491 ATGGCTACAACAGTTACATCGCTTCACTTTTTGATCATTCTCTTCACATCTGTCAAACTCTTGGCCTTGGCAGAAGAAGAAGCCCAGTTCATCCACAATGGCTTCCAAGGAGCGAGTCTGCATCTTGGTGGAATCGCGAAGATCCACCCAAACGGTCTATTGCAGCTGACCAACACTTCAAAGCAACAAATTGGCCGCGCTTTCTTCCCACTTCCTCTGAAGTTCAACACATCTTCTGCTGTGGCAAGCCAATATTTGGGACTCTTCAATGTTACAAACAACGGTAATTCTTCCAATCATGTGTTTGCAGTTGAGCTAGATACAATTTTAAGCCCAGACTTGAAAGACACAGATGGAAATCATGTGGGAGTTGATGCTATGCAGGTTTGGATAGATTATGATGATGTGCAGAAGCTAATCAATGTGACAGTAGCTCCCCTCAAAAGCCCAAAACCAAGCATGCCTCTATTGTCAACACCCATTAATCTTTCTTCTATTTTCTTGGACCTTGAAATTTCAGAGCTTCCTTCCCTACCCCCAAGGAAGAAAGAAAGGAAGACACTAGTTGTAATTGTTTTGCTGTCACTGACAACATTAGTAATTGTTCTGGTTGTGCTCATGGGAGCCGGTTACATTATAAGAAAATTGAAATTTGAAGAACTACGGGAAGAGTGGGAAGGGGAATATGGTCCTCAAAGATTCTCCTATAAGGATCTCTACAAAGCAACCAAAGGTTTCAAAGACAAAGAGCTTCTTGGAGCAGGGGGTTTTGGGAAGTTCCTATTTAGCGATGAAAATCCGATCCTTACTTGGCCTCAACGGTACCATATCCTCAGAGGAGTAGCATCTAGAGACTTTGGGCTTGCTAAATTATATGATCATGATACCAACCCTCAAACTACTCATGTAGTTGGGACCCTACAAGGATATCCTGAAGGGGGGGTTCTGCTTGATTGGGTTCTTGAATGCTGGAAAAGAGGAGCTATTCTTCTGACTAGTGATCCTAGATTGGAAGGTCATTACGTTGCAGAGGAAATGGAATTGGTTTTGAAACTAGGCCTGCTTTGTTCAAGCCCTATACCCGCAGTTCGGCCTAGCATGAGGCAAGTGATGCAGTACTTGAATGGAGATGCTCCTTTGCCAGAGATACCACGTAACTTTTCCAGTATGGGAACATTTGGAGCAAATGGTGAAGAATCAGCTGAGGTTATCACGTCATTCCCTTCATCATCTGGGACGACTACTATCCGTTCATTCTCTAGCTCTGATTCAATCCTCAACCAAGGTCGATGA 1293 43.54 MATTVTSLHFLIILFTSVKLLALAEEEAQFIHNGFQGASLHLGGIAKIHPNGLLQLTNTSKQQIGRAFFPLPLKFNTSSAVASQYLGLFNVTNNGNSSNHVFAVELDTILSPDLKDTDGNHVGVDAMQVWIDYDDVQKLINVTVAPLKSPKPSMPLLSTPINLSSIFLDLEISELPSLPPRKKERKTLVVIVLLSLTTLVIVLVVLMGAGYIIRKLKFEELREEWEGEYGPQRFSYKDLYKATKGFKDKELLGAGGFGKFLFSDENPILTWPQRYHILRGVASRDFGLAKLYDHDTNPQTTHVVGTLQGYPEGGVLLDWVLECWKRGAILLTSDPRLEGHYVAEEMELVLKLGLLCSSPIPAVRPSMRQVMQYLNGDAPLPEIPRNFSSMGTFGANGEESAEVITSFPSSSGTTTIRSFSSSDSILNQGR* 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6103855 6105883 + Vvi6g491 Vvi6g491 788068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g491 430 MobiDBLite consensus disorder prediction 407 430 - -
Vvi6g491 430 Pfam Legume lectin domain 126 168 IPR001220 GO:0030246
Vvi6g491 430 Pfam Legume lectin domain 78 125 IPR001220 GO:0030246
Vvi6g491 430 Gene3D - 127 172 - -
Vvi6g491 430 Gene3D Transferase(Phosphotransferase) domain 1 309 392 - -
Vvi6g491 430 PANTHER PUTATIVE-RELATED 79 125 - -
Vvi6g491 430 PANTHER PUTATIVE-RELATED 285 309 - -
Vvi6g491 430 PANTHER PUTATIVE-RELATED 4 80 - -
Vvi6g491 430 PANTHER PUTATIVE-RELATED 169 259 - -
Vvi6g491 430 PANTHER PUTATIVE-RELATED 312 424 - -
Vvi6g491 430 PANTHER PUTATIVE-RELATED 126 169 - -
Vvi6g491 430 PANTHER - 126 169 - -
Vvi6g491 430 PANTHER - 4 80 - -
Vvi6g491 430 PANTHER - 285 309 - -
Vvi6g491 430 PANTHER - 169 259 - -
Vvi6g491 430 PANTHER - 312 424 - -
Vvi6g491 430 PANTHER - 79 125 - -
Vvi6g491 430 Gene3D - 80 126 - -
Vvi6g491 430 CDD lectin_legume_LecRK_Arcelin_ConA 29 169 IPR001220 GO:0030246
Vvi6g491 430 SUPERFAMILY Protein kinase-like (PK-like) 229 385 IPR011009 -
Vvi6g491 430 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 169 IPR013320 -
Vvi6g491 430 Gene3D - 26 79 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g491 Vvi8g771 ECH
Vvi6g491 Vvi13g330 ECH
Vvi6g491 Vvi8g769 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g491 - - vvi:100246749 316.62