Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g522 ATGGCGGAGATCTGCTGTGGGGTTGTGAGCGATGGGGAGACGTCCACTCAGTGCGAGCCGAGTTCGCGAGTGGCGAGGCGACGGAGAATGGAGCTCCGGCGTTTCAAGTTCGTTGCCGGTGTGGCCCCTTCAGAGACCGAGAACGGGCAGAAGCGGCGGAAGCTGGAGGCGGCTTATCCTTACGCCGAGGCCTGCTCGTGGAAGTGCGCCAACACCTTTGAAAACTGCGCTTCTGAAGTAGAGGGCAGTTGTTTGCAGTCGGAACATGGAGGCTCCGACAAGGAGCATCCTCAGACGAGTTTTCAGGCGGATCTCCAGATGGAGAATGAGTATACGAAGTTCGGCATAGCATCGGTATGTGGGAGGAGAAGAGACATGGAAGACGCCGTCGCCGTGCACCCTTCCTTCCTCCGGCAACACCACCAAACCACGAATGGCTCGCACTACTTCGGAGTTTATGATGGTCACGGCTGTTCGCATGTGGCGATGAACTGCAGAGATCGAATGCATGAACTGGTGAGAGAAGAGCTAGAGAACAAGGACACGTGTACGGAGTCAGGTTGGAAGAATGCGATGGAGCGAAGCTTCAGTCGCATGGACAAGGAAGTGAATGCACGGAATATAGGAGCATCAGGAGCCGTTTGCAGGTGCGAGCTTCAAACACCTGAGTGCGATGCCGTAGGATCCACAGCCGTAGTCGCAATAGTCACACCGGAGAAGATCGTCGTCGCCAACTGCGGCGACTCCCGCGCGGTTCTCTGCCGCAACGGCAAGGCGATCCCTCTCTCCTCCGATCACAAGCCGGACCGCCCCGACGAACTTCAGCGGATCCAGTCGGCCGGTGGGCGTGTCATATTCTGGGACGGACCTAGGGTTCTGGGAGTCCTCGCCATGTCAAGAGCCATAGGCGATAACTACTTAAAGCCCTTCGTGAGCTGCGAGCCGGAGGTGACGATCACGGAACGATCGGCGGAGGACGAGTGTCTGATACTGGCGAGCGACGGTCTGTGGGACGTGGTGTCGAACGAGACAGCGTGCGGCGTGGCGCGAATGTGCCTGAAGGGGAAGGCTTGGGACAAGGCGTGCTCCGACGCCTCCATGCTGCTGACAAAGCTGGCCTTGGCTAGGCACACCGCGGACAACGTGAGCGTGGTGGTGGTGGATCTTAGGAAGGACACGTAG 1182 58.63 MAEICCGVVSDGETSTQCEPSSRVARRRRMELRRFKFVAGVAPSETENGQKRRKLEAAYPYAEACSWKCANTFENCASEVEGSCLQSEHGGSDKEHPQTSFQADLQMENEYTKFGIASVCGRRRDMEDAVAVHPSFLRQHHQTTNGSHYFGVYDGHGCSHVAMNCRDRMHELVREELENKDTCTESGWKNAMERSFSRMDKEVNARNIGASGAVCRCELQTPECDAVGSTAVVAIVTPEKIVVANCGDSRAVLCRNGKAIPLSSDHKPDRPDELQRIQSAGGRVIFWDGPRVLGVLAMSRAIGDNYLKPFVSCEPEVTITERSAEDECLILASDGLWDVVSNETACGVARMCLKGKAWDKACSDASMLLTKLALARHTADNVSVVVVDLRKDT* 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6318843 6320916 + Vvi6g522 Vvi6g522 788099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g522 393 Gene3D - 108 393 IPR036457 -
Vvi6g522 393 PANTHER PROTEIN PHOSPHATASE 2C 37 43 392 - -
Vvi6g522 393 PANTHER ALPHABET, ISOFORM E-RELATED 43 392 - -
Vvi6g522 393 ProSiteProfiles PPM-type phosphatase domain profile. 113 389 IPR001932 -
Vvi6g522 393 SMART PP2C_SIG_2 125 389 IPR001932 -
Vvi6g522 393 Pfam Protein phosphatase 2C 113 382 IPR001932 -
Vvi6g522 393 SMART PP2C_4 107 387 IPR001932 -
Vvi6g522 393 SUPERFAMILY PP2C-like 106 390 IPR036457 -
Vvi6g522 393 CDD PP2Cc 113 389 IPR001932 -
Vvi6g522 393 ProSitePatterns PPM-type phosphatase domain signature. 149 157 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g522 Vvi13g345 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g522 K14497 - vvi:100255251 785.408