Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g535 ATGTTAATAATAGTGCAGGTTTACATAGTGTATTTAGGATCCCTTCCTAAAGGGGAATTTTCACCTATGTCTGAACACCTTGGGGTTCTCGAAGATGTTCTTGAGGGCAGTTCTTCAACAGATTCTTTGGTAAGAAGTTATAAGAGAAGTTTCAATGGATTTGCAGCAAGGCTCACTGAAAAGGAACGAGAAAAATTGGCTAATAAGGAAGGCGTGGTGTCGGTTTTTCCGAGTAGAATTTTAAAACTTCATACAACAAGATCTTGGGACTTCATGGGATTCTCCGAAACATCTAGGCACAAACCTGCTCTTGAGAGTGATGTTATAATTGGAGTCTTTGACACTGGAATTTGGCCTGAATCACCTAGCTTTAGTGATAAAGATTTTGGTCCACCTCCAAGAAAATGGAAAGGTGTTTGTTCAGGTGGCAAAAATTTTACTTGCAACAAGAAGGTTATTGGAGCTCGAATCTACAATTCGCTGAATGATAGTTTCGATGTTTCAGTGAGGGACATAGATGGTCATGGATCCCACACTGCCTCAATAGCTGCTGGCAACAATGTAGAGCATGCGAGTTTTCATGGCTTAGCACAAGGAAAGGCAAGAGGAGGGGTTCCCTCTGCAAGGCTTGCCATATACAAAGTCTGTGTTTTTCTAGGGTGCGCAAGCGCGGACATTTTGGCTGCCTTTGATGATGCTATTGCAGATGGGGTTGACATCATTTCAATATCTCTTGGATTTGATTCTGCAGTTGCTTTGGAAGAGGATGCCATAGCAATTGGTGCTTTTCATGCCATGGCCGGAGGTATATTAACTGTGCACTCTGCAGGAAATGAAGGTCCTGAGGTATTTTCTACATTTAGCTCTGCACCATGGATGGTCAGTGTAGCAGCAAGCACGATTGATCGCAAAATTATTGACAGGGTGGTTCTTGGCAATGGAACAGAACTAACAGGTCGTTCATTTAATTATTTCACGATGAATGGATCCATGTACCCTCTTATATACGGAAAAGTTACTAGCCGTGCCAATGCCTGTAATAATTTCCTATCACAGTTGTGCGTGCCAGATTGTTTAAATAAGAGTGCAGTGGAAGGAAAAATTCTACTATGTGAAAGCGCTTATGGAGATGAGGGCGCTCATTGGGCTGGTGCCGCCGGCTCAATCAAATTGGATGTAGGTGTTTCTTCTGTTGTCCCCTTACCTACAATAGCTTTACGTGGTAAAGACTTGCGCCTCGTCCGATCCTATTATAATTCCACAAAAAAGGCTGAAGCAAAGATACTGAAGAGTGAGGCAATCAAAGATTCTTCTGCTCCTGTAGTGGCTCCCTTTTCATCACGAGGGCCAAACGCAGCCATACTTGAGATTATGAAGCCAGATATTACAGCCCCTGGAGTAGATATATTGGCAGCATTCTCCCCTATTCCTAAACTTGTAGACGGCATATCTGTGGAATATAATATATTATCAGGAACCTCCATGGCTTGCCCCCATGTTGCTGGAATTGCTGCTTATGTTAAAAGTTTCCACCCCGCCTGGTCTGCTTCAGCCATCCGATCTGCTCTTATGACTACTGCTCGGCCCATGAAAGTTTCTGCAAATCTACATGGTGTACTCAGTTTTGGGTCTGGGCATGTCGATCCAGTTAAAGCTATAAGTCCTGGATTAGTGTATGAAACCACTAAGGACAACTACACACAGATGTTGTGCGACATGGGTTACAACACAACAATGGTGAGACTCATTTCAGGAGACAACAGCAGTTGTCCAAAGGACAGCAAAGGTTCCCCAAAAGATCTCAACTATCCTTCAATGACAGTTTACGTTAAGCAGTTAAGGCCTTTTAAAGTAGAGTTTCCAAGAACAGTTACAAATGTTGGCCGCTCCAACTCTACTTATAAAGCACAAGTCATTATCAGAAAACATCCACGTATGAAGGTCGACGTGAATCCTCCCATGCTCTCTTTCAAGTTAATAAAGGAGAAGAAATCTTTTGTGGTGACTGTTACTGGTCAAGGAATGACGATGGAGAGACCGGTGGAGTCGGCGACACTGGTGTGGTCTGATGGCACTCATACTGTGAGGAGTCCCATTACGGTCTACACTGACATGTTGATTGATTAA 2127 43.25 MLIIVQVYIVYLGSLPKGEFSPMSEHLGVLEDVLEGSSSTDSLVRSYKRSFNGFAARLTEKEREKLANKEGVVSVFPSRILKLHTTRSWDFMGFSETSRHKPALESDVIIGVFDTGIWPESPSFSDKDFGPPPRKWKGVCSGGKNFTCNKKVIGARIYNSLNDSFDVSVRDIDGHGSHTASIAAGNNVEHASFHGLAQGKARGGVPSARLAIYKVCVFLGCASADILAAFDDAIADGVDIISISLGFDSAVALEEDAIAIGAFHAMAGGILTVHSAGNEGPEVFSTFSSAPWMVSVAASTIDRKIIDRVVLGNGTELTGRSFNYFTMNGSMYPLIYGKVTSRANACNNFLSQLCVPDCLNKSAVEGKILLCESAYGDEGAHWAGAAGSIKLDVGVSSVVPLPTIALRGKDLRLVRSYYNSTKKAEAKILKSEAIKDSSAPVVAPFSSRGPNAAILEIMKPDITAPGVDILAAFSPIPKLVDGISVEYNILSGTSMACPHVAGIAAYVKSFHPAWSASAIRSALMTTARPMKVSANLHGVLSFGSGHVDPVKAISPGLVYETTKDNYTQMLCDMGYNTTMVRLISGDNSSCPKDSKGSPKDLNYPSMTVYVKQLRPFKVEFPRTVTNVGRSNSTYKAQVIIRKHPRMKVDVNPPMLSFKLIKEKKSFVVTVTGQGMTMERPVESATLVWSDGTHTVRSPITVYTDMLID* 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6420421 6423513 + Vvi6g535 Vvi6g535 788112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g535 708 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 7 703 - -
Vvi6g535 708 ProSiteProfiles Serine proteases, subtilase domain profile. 88 553 - -
Vvi6g535 708 CDD PA_subtilisin_like 309 428 - -
Vvi6g535 708 ProSitePatterns Serine proteases, subtilase family, serine active site. 492 502 IPR023828 -
Vvi6g535 708 Pfam Peptidase inhibitor I9 7 84 IPR010259 -
Vvi6g535 708 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 5 84 IPR037045 -
Vvi6g535 708 CDD Peptidases_S8_3 81 527 IPR034197 -
Vvi6g535 708 Pfam Fibronectin type-III domain 600 701 IPR041469 -
Vvi6g535 708 Gene3D Peptidase S8/S53 domain 107 566 IPR036852 GO:0004252|GO:0006508
Vvi6g535 708 Gene3D - 570 704 - -
Vvi6g535 708 SUPERFAMILY Subtilisin-like 83 557 IPR036852 GO:0004252|GO:0006508
Vvi6g535 708 Pfam Subtilase family 106 528 IPR000209 GO:0006508|GO:0008236
Vvi6g535 708 Gene3D - 302 435 - -
Vvi6g535 708 PRINTS Subtilisin serine protease family (S8) signature 105 124 IPR015500 -
Vvi6g535 708 PRINTS Subtilisin serine protease family (S8) signature 171 184 IPR015500 -
Vvi6g535 708 PRINTS Subtilisin serine protease family (S8) signature 491 507 IPR015500 -
Vvi6g535 708 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 703 IPR045051 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g535 Vvi13g375 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g535 - - vvi:100243364 1389.4