Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi6g536 | ATGTTAATGATAGGGCAGGTTTACATAGCGTATCTAGGATCCCTTCCTGAGGGGGAATTTTCACCTATGTCTCAACACCTTAGTGTTCTTGACGAAGTCCTTGAGGGCAGTTCGGCAACAGACTCTCTGGTAAGAAGTTATAAGAGAAGTTTCAACGGATTTGCAGCCAAGCTCACTGAAAAAGAACGAGAAAAATTGGCTAATAAGGAAGGCGTGGTGTCGATTTTTGAAAATAAAATTTTAAAGCTTCAGACAACAAGATCTTGGGACTTCATGGGATTCTCTGAAACTGCAAGGCGAAAACCTGCTCTTGAGAGTGATGTTATAATTGGGGTCTTTGACACTGGAATCTGGCCTGAATCACAGAGCTTTAGTGATAAAGATTTTGGTCCACTTCCAAGAAAATGGAAAGGTGTTTGTTCAGGTGGCGAAAGTTTTACTTGCAACAAGAAGGTTATCGGAGCTCGAATCTACAATTCGCTGAATGATACTTTCGATAATGAGGTGAGGGACATAGATGGTCATGGATCCCACACTGCCTCAATAGCTGCTGGCAACAATGTAGAGAATGCGAGTTTTCATGGCTTAGCACAAGGAAAGGCAAGAGGAGGGGTTCCCTCTGCAAGGCTTGCTATATACAAAGTCTGTGTTTTGATAGGGTGCGGAAGCGCGGACATTTTGGCTGCCTTTGATGATGCTATTGCAGATGGGGTTGACATCATTTCAATTTCCCTTGGATTTGAAGCTGCAGTTGCTTTGGAAGAGGATCCCATAGCAATTGGTGCTTTTCATGCCATGGCCAGAAGTATTTTAACTGTGAATTCTGGAGGAAATAGAGGTCCGGAAGTATACTCTATAAATAGTGTTGCACCATGGATGGTCAGTGTGGCAGCAAGCACCACTGATCGCAAAATTATTGACAGGGTGGTTCTTGGCAATGGAAAAGAACTAACAGGTCGTTCATTTAATTATTTCACGATGAATGGATCCATGTACCCTATGATATACGGAAATGATTCTAGCCTCAAAGATGCCTGTAATGAATTCCTATCCAAGGTGTGCGTGAAGGATTGTTTAAATAGTAGTGCAGTGAAAGGAAAAATTCTACTATGCGATAGCACTCATGGAGATGACGGTGCTCACTGGGCTGGTGCCTCCGGAACAATCACATGGGATAATTCTGGTGTTGCTTCTGTCTTCCCCTTACCTACAATAGCTCTAAATGACAGTGACTTGCAAATCGTCCATTCCTACTACAAGTCCACAAACAAAGCTAAAGCAAAGATACTGAAGAGTGAAGCGATCAAAGATTCTTCTGCTCCTGTAGTGGCTTCCTTTTCATCACGAGGGCCAAACTCAGTCATACCTGAAATTATGAAGCCAGATATAACGGCCCCTGGAGTAGATATATTGGCAGCATTCTCCCCTATTCCTAAACTTGTAGACGGCATATCTGTGGAATATAACATATTATCAGGAACCTCCATGGCTTGCCCCCATGTTGCTGGAATTGCTGCTTATGTTAAAAGTTTCCACCCCGCCTGGTCTGCTTCAGCCATCCGATCTGCTCTTATGACTACTGCTCGGCCCATGAAAGTTTCTGCAAATCTACATGGTGTACTCAGTTTTGGGTCTGGGCATGTCGATCCAGTTAAAGCTATAAGTCCTGGATTAGTGTATGAAATCACTAAGGACAACTACACACAGATGCTGTGCGACATGGTAGAGTTTCCCAGAACTGTTACAAATGTTGGCCGCTCCAACTCTACTTATAAAGCACAAGTCATTACCAGAAAACATCCACGTATAAAGGTCGAAGTGAATCCTCCCATGCTCTCTTTCAAGTTAATAAAGGAGAAGAAATCTTTTGATAAGGATAGGGTGAAAACTTTAGATTTGCAATGGCAAAATTTTATAAAAAATAGGAGAAAAATCGTGGAGAGAAAAAGGAAGGATTCTAGCAGTTGTCCTGAGGACAAAAAAGGTTTCCCAAAAGATCTCAATTATCCTTCAATGACAGTTAACGTTATGCAGTCAAAGCCTTTTAAAGTAGAGTTTCCAAGAACAGTTACAAATGTGGGCAACTCAAGCTCTACATATAAAGCAGAAGTCGTTTTAGGAAAACAACCACCAATGAAGGTCGAAGTGAATCCTTCCATGCTCTCCTTCAAGTTAGAAAATGAGAAAAAATCTTTTGTTGTGACTGGTACTAGGCAAGGAATGACAAGCAAGAGTCCGGTGGAGTCAGGGACACTGGTATGGTCTGATGGCACTCAAACTGTGAGGATAGCTTTGCCGATAATACAGGTTTATGTGGTGTACCTGGGTCACCTTCCTGAGAATCAGGCATACTCACCCATGGGTCAACAGTATAGTATTCTTGGAAGTGTTCTTGAGACGAGTTCTATATCGCAAGCCTTCGTGAGAAGCTATCGAAAGAGTTTCAATGGATTTGCAGCCAGGCTCACTGATAGAGAAAAAGAAAGACTAGCTAATATGGAAGACGTGGTGTCTATATTTCCAAGCAAAACTCTCCAACCTCAGACATCACGTTCTTGGGATTTCATGGGCTTCACTGAGTCCATCAGGCGAAGGCCTTTTGTTGAGAGTGATGTTATAATCGGTGTTTTTGACACTGGAATTTGGCCTGAATCAGAGAGTTTTAGTGATAAAGGTTTTGGCCCTATCCCAAGAAAATGGAGAGGAGTTTGTCAGGGAGGCAAAAATTTCACCTGCAACAATAAGCTCATTGGAGCTCGAAATTACAATGCAAAGAAAGCTCCTGATAATTATGTGAGGGATATAGATGGTCATGGAACCCACACAGCCTCAACAGCAGCTGGCAACCCAGTAACTGCAAGTTTCTTTGGGGTGGCAAAGGGAACTGCAAGAGGAGGGGTTCCATCTGCAAGGATTGCTGCATATAAGGTTTGCCATCCATCAGGATGTGAGGAAGCAGATATAATGGCTGCCTTCGATGATGCTATTGCCGATGGGGTTGACATCATTACAATTTCATTAGGCCTGGGAGGAGCAGTTGATTTCACTATTGACTCCATCGCCATTGGCGCTTTTCATGCTATGCAGAAAGGTATTTTAACCGTGAATTCTGCAGGCAACAATGGACCCAAGCGAGCAACCGCAGTAGGCGTTGCACCATGGTTACTCAGTGTAGCGGCCAGCAGCACAGATCGCAGAATCATTAGCAAAGTTATTCTTGGGGATGGAACAAGACTAACTGGTGCAGCAATTAATTCTTTCCAGTTGAGAGGAGAGAAGTTTCCTCTTGTGTATGGAAAAGATGCTACATCTAAATGTGATGCATTCAGTGCCCAATGCATATCAAAGTGTTTAGACAGTAAATTGGTGAAGGGAAAGATTGTAGTATGTCAAGCCTTCTGGGGTTTGCAGGAAGCTTTCAAGGCTGGTGCCGTTGGGGCAATTTTGCTGAATGACTTCCAAACTGATGTTTCTTTTATTGTCCCCTTGCCTGCATCAGCTTTAAGACCGAAGCGTTTTAACAAGCTGTTGTCATACATCAATTCAACAAAATCGCCTGAAGCAACCATATTGAGAAGTGTGAGTAGAAAAGATGCCTCTGCTCCTGTTGTTGCTCAGTTTTCATCGAGAGGCCCTAATATCATTTTGCCTGAAATTCTGAAGCCTGATATAAGTGCCCCAGGAGTAGATATCCTGGCAGCATTCTCCCCACTCGCTTCCCCCTCAGAGATCAGTGGAGACAAAAGGGCAGCTAGATACAATATAATATCAGGAACCTCTATGGCCTGTCCCCATGTTGCTGGAGTGGCTGCCTACGTTAAGACTTTCCACCCTAACTGGTCTCCTTCAGCCATCCAATCCGCTCTTATGACTACAGCATGGAGGATGAATGCTACCAGAACCCCAGATGGCGAACTCGCTTATGGATCTGGGCATGTAAATCCAGTAAAAGCCATAAGTCCTGGTTTAATATACCATGCCCATAAACAAGACTACGTTAATATGCTATGCGGCATGGGCTATGATTCAAAAAATATGAGACTCATAACAGGAGAAAACAGCCAATGTCCCAAGAACAGTACATTCTCAGCAAAGGATCTCAATTATCCTTCCATGGCAGTTAAAGTTCCACCAAATAAGCCTTTCAAAGTCGAGTTCCCTAGGAGAGTTAAAAATGTTGGCCCTGCGCCGTCCATATACAAAGCAGAAGTCACCACAACAAGCCCACGACTCAAGGTGCGCGTGATTCCTAATGTTCTCTCTTTCCGGTCATTATATGAGGAGAAACACTTTGTTGTGAGTGTTGTTGGCAAAGGATTGGAATTAATGGAGTCTGCTTCGCTGGTGTGGTCCGATGGTAGGCATCTGGTGAAGAGTCCCATTGTTGTGTATACAGATAATGATTTGCCTTCAGATTAG | 4419 | 43.38 | MLMIGQVYIAYLGSLPEGEFSPMSQHLSVLDEVLEGSSATDSLVRSYKRSFNGFAAKLTEKEREKLANKEGVVSIFENKILKLQTTRSWDFMGFSETARRKPALESDVIIGVFDTGIWPESQSFSDKDFGPLPRKWKGVCSGGESFTCNKKVIGARIYNSLNDTFDNEVRDIDGHGSHTASIAAGNNVENASFHGLAQGKARGGVPSARLAIYKVCVLIGCGSADILAAFDDAIADGVDIISISLGFEAAVALEEDPIAIGAFHAMARSILTVNSGGNRGPEVYSINSVAPWMVSVAASTTDRKIIDRVVLGNGKELTGRSFNYFTMNGSMYPMIYGNDSSLKDACNEFLSKVCVKDCLNSSAVKGKILLCDSTHGDDGAHWAGASGTITWDNSGVASVFPLPTIALNDSDLQIVHSYYKSTNKAKAKILKSEAIKDSSAPVVASFSSRGPNSVIPEIMKPDITAPGVDILAAFSPIPKLVDGISVEYNILSGTSMACPHVAGIAAYVKSFHPAWSASAIRSALMTTARPMKVSANLHGVLSFGSGHVDPVKAISPGLVYEITKDNYTQMLCDMVEFPRTVTNVGRSNSTYKAQVITRKHPRIKVEVNPPMLSFKLIKEKKSFDKDRVKTLDLQWQNFIKNRRKIVERKRKDSSSCPEDKKGFPKDLNYPSMTVNVMQSKPFKVEFPRTVTNVGNSSSTYKAEVVLGKQPPMKVEVNPSMLSFKLENEKKSFVVTGTRQGMTSKSPVESGTLVWSDGTQTVRIALPIIQVYVVYLGHLPENQAYSPMGQQYSILGSVLETSSISQAFVRSYRKSFNGFAARLTDREKERLANMEDVVSIFPSKTLQPQTSRSWDFMGFTESIRRRPFVESDVIIGVFDTGIWPESESFSDKGFGPIPRKWRGVCQGGKNFTCNNKLIGARNYNAKKAPDNYVRDIDGHGTHTASTAAGNPVTASFFGVAKGTARGGVPSARIAAYKVCHPSGCEEADIMAAFDDAIADGVDIITISLGLGGAVDFTIDSIAIGAFHAMQKGILTVNSAGNNGPKRATAVGVAPWLLSVAASSTDRRIISKVILGDGTRLTGAAINSFQLRGEKFPLVYGKDATSKCDAFSAQCISKCLDSKLVKGKIVVCQAFWGLQEAFKAGAVGAILLNDFQTDVSFIVPLPASALRPKRFNKLLSYINSTKSPEATILRSVSRKDASAPVVAQFSSRGPNIILPEILKPDISAPGVDILAAFSPLASPSEISGDKRAARYNIISGTSMACPHVAGVAAYVKTFHPNWSPSAIQSALMTTAWRMNATRTPDGELAYGSGHVNPVKAISPGLIYHAHKQDYVNMLCGMGYDSKNMRLITGENSQCPKNSTFSAKDLNYPSMAVKVPPNKPFKVEFPRRVKNVGPAPSIYKAEVTTTSPRLKVRVIPNVLSFRSLYEEKHFVVSVVGKGLELMESASLVWSDGRHLVKSPIVVYTDNDLPSD* | 1473 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 6434775 | 6460996 | + | Vvi6g536 | Vvi6g536 | 788113 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi6g536 | 1472 | PRINTS | Subtilisin serine protease family (S8) signature | 869 | 888 | IPR015500 | - | |
Vvi6g536 | 1472 | PRINTS | Subtilisin serine protease family (S8) signature | 934 | 947 | IPR015500 | - | |
Vvi6g536 | 1472 | PRINTS | Subtilisin serine protease family (S8) signature | 1257 | 1273 | IPR015500 | - | |
Vvi6g536 | 1472 | Pfam | Peptidase inhibitor I9 | 8 | 83 | IPR010259 | - | |
Vvi6g536 | 1472 | Pfam | Peptidase inhibitor I9 | 770 | 846 | IPR010259 | - | |
Vvi6g536 | 1472 | Pfam | Fibronectin type-III domain | 574 | 624 | IPR041469 | - | |
Vvi6g536 | 1472 | Pfam | Fibronectin type-III domain | 666 | 765 | IPR041469 | - | |
Vvi6g536 | 1472 | Pfam | Fibronectin type-III domain | 1366 | 1463 | IPR041469 | - | |
Vvi6g536 | 1472 | CDD | Peptidases_S8_3 | 81 | 528 | IPR034197 | - | |
Vvi6g536 | 1472 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 4 | 84 | IPR037045 | - | |
Vvi6g536 | 1472 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 769 | 847 | IPR037045 | - | |
Vvi6g536 | 1472 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 88 | 554 | - | - | |
Vvi6g536 | 1472 | Gene3D | - | 1064 | 1197 | - | - | |
Vvi6g536 | 1472 | Gene3D | - | 302 | 436 | - | - | |
Vvi6g536 | 1472 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 493 | 503 | IPR023828 | - | |
Vvi6g536 | 1472 | Gene3D | - | 565 | 637 | - | - | |
Vvi6g536 | 1472 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.3 | 7 | 574 | - | - | |
Vvi6g536 | 1472 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.3 | 576 | 623 | - | - | |
Vvi6g536 | 1472 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.3 | 770 | 1465 | - | - | |
Vvi6g536 | 1472 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT4.3 | 652 | 765 | - | - | |
Vvi6g536 | 1472 | Gene3D | Peptidase S8/S53 domain | 871 | 1332 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g536 | 1472 | Gene3D | Peptidase S8/S53 domain | 107 | 564 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g536 | 1472 | Pfam | Subtilase family | 106 | 529 | IPR000209 | GO:0006508|GO:0008236 | |
Vvi6g536 | 1472 | Pfam | Subtilase family | 870 | 1297 | IPR000209 | GO:0006508|GO:0008236 | |
Vvi6g536 | 1472 | SUPERFAMILY | Subtilisin-like | 83 | 558 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g536 | 1472 | Gene3D | - | 638 | 768 | - | - | |
Vvi6g536 | 1472 | Gene3D | - | 1336 | 1466 | - | - | |
Vvi6g536 | 1472 | CDD | Peptidases_S8_3 | 845 | 1294 | IPR034197 | - | |
Vvi6g536 | 1472 | SUPERFAMILY | Subtilisin-like | 853 | 1319 | IPR036852 | GO:0004252|GO:0006508 | |
Vvi6g536 | 1472 | CDD | PA_subtilisin_like | 1071 | 1190 | - | - | |
Vvi6g536 | 1472 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 852 | 1319 | - | - | |
Vvi6g536 | 1472 | CDD | PA_subtilisin_like | 309 | 429 | - | - | |
Vvi6g536 | 1472 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 1258 | 1268 | IPR023828 | - | |
Vvi6g536 | 1472 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 7 | 574 | IPR045051 | - | |
Vvi6g536 | 1472 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 576 | 623 | IPR045051 | - | |
Vvi6g536 | 1472 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 770 | 1465 | IPR045051 | - | |
Vvi6g536 | 1472 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 652 | 765 | IPR045051 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi6g536 | - | - | vvi:100241625 | 1354.35 |