Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g536 ATGTTAATGATAGGGCAGGTTTACATAGCGTATCTAGGATCCCTTCCTGAGGGGGAATTTTCACCTATGTCTCAACACCTTAGTGTTCTTGACGAAGTCCTTGAGGGCAGTTCGGCAACAGACTCTCTGGTAAGAAGTTATAAGAGAAGTTTCAACGGATTTGCAGCCAAGCTCACTGAAAAAGAACGAGAAAAATTGGCTAATAAGGAAGGCGTGGTGTCGATTTTTGAAAATAAAATTTTAAAGCTTCAGACAACAAGATCTTGGGACTTCATGGGATTCTCTGAAACTGCAAGGCGAAAACCTGCTCTTGAGAGTGATGTTATAATTGGGGTCTTTGACACTGGAATCTGGCCTGAATCACAGAGCTTTAGTGATAAAGATTTTGGTCCACTTCCAAGAAAATGGAAAGGTGTTTGTTCAGGTGGCGAAAGTTTTACTTGCAACAAGAAGGTTATCGGAGCTCGAATCTACAATTCGCTGAATGATACTTTCGATAATGAGGTGAGGGACATAGATGGTCATGGATCCCACACTGCCTCAATAGCTGCTGGCAACAATGTAGAGAATGCGAGTTTTCATGGCTTAGCACAAGGAAAGGCAAGAGGAGGGGTTCCCTCTGCAAGGCTTGCTATATACAAAGTCTGTGTTTTGATAGGGTGCGGAAGCGCGGACATTTTGGCTGCCTTTGATGATGCTATTGCAGATGGGGTTGACATCATTTCAATTTCCCTTGGATTTGAAGCTGCAGTTGCTTTGGAAGAGGATCCCATAGCAATTGGTGCTTTTCATGCCATGGCCAGAAGTATTTTAACTGTGAATTCTGGAGGAAATAGAGGTCCGGAAGTATACTCTATAAATAGTGTTGCACCATGGATGGTCAGTGTGGCAGCAAGCACCACTGATCGCAAAATTATTGACAGGGTGGTTCTTGGCAATGGAAAAGAACTAACAGGTCGTTCATTTAATTATTTCACGATGAATGGATCCATGTACCCTATGATATACGGAAATGATTCTAGCCTCAAAGATGCCTGTAATGAATTCCTATCCAAGGTGTGCGTGAAGGATTGTTTAAATAGTAGTGCAGTGAAAGGAAAAATTCTACTATGCGATAGCACTCATGGAGATGACGGTGCTCACTGGGCTGGTGCCTCCGGAACAATCACATGGGATAATTCTGGTGTTGCTTCTGTCTTCCCCTTACCTACAATAGCTCTAAATGACAGTGACTTGCAAATCGTCCATTCCTACTACAAGTCCACAAACAAAGCTAAAGCAAAGATACTGAAGAGTGAAGCGATCAAAGATTCTTCTGCTCCTGTAGTGGCTTCCTTTTCATCACGAGGGCCAAACTCAGTCATACCTGAAATTATGAAGCCAGATATAACGGCCCCTGGAGTAGATATATTGGCAGCATTCTCCCCTATTCCTAAACTTGTAGACGGCATATCTGTGGAATATAACATATTATCAGGAACCTCCATGGCTTGCCCCCATGTTGCTGGAATTGCTGCTTATGTTAAAAGTTTCCACCCCGCCTGGTCTGCTTCAGCCATCCGATCTGCTCTTATGACTACTGCTCGGCCCATGAAAGTTTCTGCAAATCTACATGGTGTACTCAGTTTTGGGTCTGGGCATGTCGATCCAGTTAAAGCTATAAGTCCTGGATTAGTGTATGAAATCACTAAGGACAACTACACACAGATGCTGTGCGACATGGTAGAGTTTCCCAGAACTGTTACAAATGTTGGCCGCTCCAACTCTACTTATAAAGCACAAGTCATTACCAGAAAACATCCACGTATAAAGGTCGAAGTGAATCCTCCCATGCTCTCTTTCAAGTTAATAAAGGAGAAGAAATCTTTTGATAAGGATAGGGTGAAAACTTTAGATTTGCAATGGCAAAATTTTATAAAAAATAGGAGAAAAATCGTGGAGAGAAAAAGGAAGGATTCTAGCAGTTGTCCTGAGGACAAAAAAGGTTTCCCAAAAGATCTCAATTATCCTTCAATGACAGTTAACGTTATGCAGTCAAAGCCTTTTAAAGTAGAGTTTCCAAGAACAGTTACAAATGTGGGCAACTCAAGCTCTACATATAAAGCAGAAGTCGTTTTAGGAAAACAACCACCAATGAAGGTCGAAGTGAATCCTTCCATGCTCTCCTTCAAGTTAGAAAATGAGAAAAAATCTTTTGTTGTGACTGGTACTAGGCAAGGAATGACAAGCAAGAGTCCGGTGGAGTCAGGGACACTGGTATGGTCTGATGGCACTCAAACTGTGAGGATAGCTTTGCCGATAATACAGGTTTATGTGGTGTACCTGGGTCACCTTCCTGAGAATCAGGCATACTCACCCATGGGTCAACAGTATAGTATTCTTGGAAGTGTTCTTGAGACGAGTTCTATATCGCAAGCCTTCGTGAGAAGCTATCGAAAGAGTTTCAATGGATTTGCAGCCAGGCTCACTGATAGAGAAAAAGAAAGACTAGCTAATATGGAAGACGTGGTGTCTATATTTCCAAGCAAAACTCTCCAACCTCAGACATCACGTTCTTGGGATTTCATGGGCTTCACTGAGTCCATCAGGCGAAGGCCTTTTGTTGAGAGTGATGTTATAATCGGTGTTTTTGACACTGGAATTTGGCCTGAATCAGAGAGTTTTAGTGATAAAGGTTTTGGCCCTATCCCAAGAAAATGGAGAGGAGTTTGTCAGGGAGGCAAAAATTTCACCTGCAACAATAAGCTCATTGGAGCTCGAAATTACAATGCAAAGAAAGCTCCTGATAATTATGTGAGGGATATAGATGGTCATGGAACCCACACAGCCTCAACAGCAGCTGGCAACCCAGTAACTGCAAGTTTCTTTGGGGTGGCAAAGGGAACTGCAAGAGGAGGGGTTCCATCTGCAAGGATTGCTGCATATAAGGTTTGCCATCCATCAGGATGTGAGGAAGCAGATATAATGGCTGCCTTCGATGATGCTATTGCCGATGGGGTTGACATCATTACAATTTCATTAGGCCTGGGAGGAGCAGTTGATTTCACTATTGACTCCATCGCCATTGGCGCTTTTCATGCTATGCAGAAAGGTATTTTAACCGTGAATTCTGCAGGCAACAATGGACCCAAGCGAGCAACCGCAGTAGGCGTTGCACCATGGTTACTCAGTGTAGCGGCCAGCAGCACAGATCGCAGAATCATTAGCAAAGTTATTCTTGGGGATGGAACAAGACTAACTGGTGCAGCAATTAATTCTTTCCAGTTGAGAGGAGAGAAGTTTCCTCTTGTGTATGGAAAAGATGCTACATCTAAATGTGATGCATTCAGTGCCCAATGCATATCAAAGTGTTTAGACAGTAAATTGGTGAAGGGAAAGATTGTAGTATGTCAAGCCTTCTGGGGTTTGCAGGAAGCTTTCAAGGCTGGTGCCGTTGGGGCAATTTTGCTGAATGACTTCCAAACTGATGTTTCTTTTATTGTCCCCTTGCCTGCATCAGCTTTAAGACCGAAGCGTTTTAACAAGCTGTTGTCATACATCAATTCAACAAAATCGCCTGAAGCAACCATATTGAGAAGTGTGAGTAGAAAAGATGCCTCTGCTCCTGTTGTTGCTCAGTTTTCATCGAGAGGCCCTAATATCATTTTGCCTGAAATTCTGAAGCCTGATATAAGTGCCCCAGGAGTAGATATCCTGGCAGCATTCTCCCCACTCGCTTCCCCCTCAGAGATCAGTGGAGACAAAAGGGCAGCTAGATACAATATAATATCAGGAACCTCTATGGCCTGTCCCCATGTTGCTGGAGTGGCTGCCTACGTTAAGACTTTCCACCCTAACTGGTCTCCTTCAGCCATCCAATCCGCTCTTATGACTACAGCATGGAGGATGAATGCTACCAGAACCCCAGATGGCGAACTCGCTTATGGATCTGGGCATGTAAATCCAGTAAAAGCCATAAGTCCTGGTTTAATATACCATGCCCATAAACAAGACTACGTTAATATGCTATGCGGCATGGGCTATGATTCAAAAAATATGAGACTCATAACAGGAGAAAACAGCCAATGTCCCAAGAACAGTACATTCTCAGCAAAGGATCTCAATTATCCTTCCATGGCAGTTAAAGTTCCACCAAATAAGCCTTTCAAAGTCGAGTTCCCTAGGAGAGTTAAAAATGTTGGCCCTGCGCCGTCCATATACAAAGCAGAAGTCACCACAACAAGCCCACGACTCAAGGTGCGCGTGATTCCTAATGTTCTCTCTTTCCGGTCATTATATGAGGAGAAACACTTTGTTGTGAGTGTTGTTGGCAAAGGATTGGAATTAATGGAGTCTGCTTCGCTGGTGTGGTCCGATGGTAGGCATCTGGTGAAGAGTCCCATTGTTGTGTATACAGATAATGATTTGCCTTCAGATTAG 4419 43.38 MLMIGQVYIAYLGSLPEGEFSPMSQHLSVLDEVLEGSSATDSLVRSYKRSFNGFAAKLTEKEREKLANKEGVVSIFENKILKLQTTRSWDFMGFSETARRKPALESDVIIGVFDTGIWPESQSFSDKDFGPLPRKWKGVCSGGESFTCNKKVIGARIYNSLNDTFDNEVRDIDGHGSHTASIAAGNNVENASFHGLAQGKARGGVPSARLAIYKVCVLIGCGSADILAAFDDAIADGVDIISISLGFEAAVALEEDPIAIGAFHAMARSILTVNSGGNRGPEVYSINSVAPWMVSVAASTTDRKIIDRVVLGNGKELTGRSFNYFTMNGSMYPMIYGNDSSLKDACNEFLSKVCVKDCLNSSAVKGKILLCDSTHGDDGAHWAGASGTITWDNSGVASVFPLPTIALNDSDLQIVHSYYKSTNKAKAKILKSEAIKDSSAPVVASFSSRGPNSVIPEIMKPDITAPGVDILAAFSPIPKLVDGISVEYNILSGTSMACPHVAGIAAYVKSFHPAWSASAIRSALMTTARPMKVSANLHGVLSFGSGHVDPVKAISPGLVYEITKDNYTQMLCDMVEFPRTVTNVGRSNSTYKAQVITRKHPRIKVEVNPPMLSFKLIKEKKSFDKDRVKTLDLQWQNFIKNRRKIVERKRKDSSSCPEDKKGFPKDLNYPSMTVNVMQSKPFKVEFPRTVTNVGNSSSTYKAEVVLGKQPPMKVEVNPSMLSFKLENEKKSFVVTGTRQGMTSKSPVESGTLVWSDGTQTVRIALPIIQVYVVYLGHLPENQAYSPMGQQYSILGSVLETSSISQAFVRSYRKSFNGFAARLTDREKERLANMEDVVSIFPSKTLQPQTSRSWDFMGFTESIRRRPFVESDVIIGVFDTGIWPESESFSDKGFGPIPRKWRGVCQGGKNFTCNNKLIGARNYNAKKAPDNYVRDIDGHGTHTASTAAGNPVTASFFGVAKGTARGGVPSARIAAYKVCHPSGCEEADIMAAFDDAIADGVDIITISLGLGGAVDFTIDSIAIGAFHAMQKGILTVNSAGNNGPKRATAVGVAPWLLSVAASSTDRRIISKVILGDGTRLTGAAINSFQLRGEKFPLVYGKDATSKCDAFSAQCISKCLDSKLVKGKIVVCQAFWGLQEAFKAGAVGAILLNDFQTDVSFIVPLPASALRPKRFNKLLSYINSTKSPEATILRSVSRKDASAPVVAQFSSRGPNIILPEILKPDISAPGVDILAAFSPLASPSEISGDKRAARYNIISGTSMACPHVAGVAAYVKTFHPNWSPSAIQSALMTTAWRMNATRTPDGELAYGSGHVNPVKAISPGLIYHAHKQDYVNMLCGMGYDSKNMRLITGENSQCPKNSTFSAKDLNYPSMAVKVPPNKPFKVEFPRRVKNVGPAPSIYKAEVTTTSPRLKVRVIPNVLSFRSLYEEKHFVVSVVGKGLELMESASLVWSDGRHLVKSPIVVYTDNDLPSD* 1473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6434775 6460996 + Vvi6g536 Vvi6g536 788113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g536 1472 PRINTS Subtilisin serine protease family (S8) signature 869 888 IPR015500 -
Vvi6g536 1472 PRINTS Subtilisin serine protease family (S8) signature 934 947 IPR015500 -
Vvi6g536 1472 PRINTS Subtilisin serine protease family (S8) signature 1257 1273 IPR015500 -
Vvi6g536 1472 Pfam Peptidase inhibitor I9 8 83 IPR010259 -
Vvi6g536 1472 Pfam Peptidase inhibitor I9 770 846 IPR010259 -
Vvi6g536 1472 Pfam Fibronectin type-III domain 574 624 IPR041469 -
Vvi6g536 1472 Pfam Fibronectin type-III domain 666 765 IPR041469 -
Vvi6g536 1472 Pfam Fibronectin type-III domain 1366 1463 IPR041469 -
Vvi6g536 1472 CDD Peptidases_S8_3 81 528 IPR034197 -
Vvi6g536 1472 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 84 IPR037045 -
Vvi6g536 1472 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 769 847 IPR037045 -
Vvi6g536 1472 ProSiteProfiles Serine proteases, subtilase domain profile. 88 554 - -
Vvi6g536 1472 Gene3D - 1064 1197 - -
Vvi6g536 1472 Gene3D - 302 436 - -
Vvi6g536 1472 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
Vvi6g536 1472 Gene3D - 565 637 - -
Vvi6g536 1472 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 7 574 - -
Vvi6g536 1472 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 576 623 - -
Vvi6g536 1472 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 770 1465 - -
Vvi6g536 1472 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 652 765 - -
Vvi6g536 1472 Gene3D Peptidase S8/S53 domain 871 1332 IPR036852 GO:0004252|GO:0006508
Vvi6g536 1472 Gene3D Peptidase S8/S53 domain 107 564 IPR036852 GO:0004252|GO:0006508
Vvi6g536 1472 Pfam Subtilase family 106 529 IPR000209 GO:0006508|GO:0008236
Vvi6g536 1472 Pfam Subtilase family 870 1297 IPR000209 GO:0006508|GO:0008236
Vvi6g536 1472 SUPERFAMILY Subtilisin-like 83 558 IPR036852 GO:0004252|GO:0006508
Vvi6g536 1472 Gene3D - 638 768 - -
Vvi6g536 1472 Gene3D - 1336 1466 - -
Vvi6g536 1472 CDD Peptidases_S8_3 845 1294 IPR034197 -
Vvi6g536 1472 SUPERFAMILY Subtilisin-like 853 1319 IPR036852 GO:0004252|GO:0006508
Vvi6g536 1472 CDD PA_subtilisin_like 1071 1190 - -
Vvi6g536 1472 ProSiteProfiles Serine proteases, subtilase domain profile. 852 1319 - -
Vvi6g536 1472 CDD PA_subtilisin_like 309 429 - -
Vvi6g536 1472 ProSitePatterns Serine proteases, subtilase family, serine active site. 1258 1268 IPR023828 -
Vvi6g536 1472 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 7 574 IPR045051 -
Vvi6g536 1472 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 576 623 IPR045051 -
Vvi6g536 1472 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 770 1465 IPR045051 -
Vvi6g536 1472 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 652 765 IPR045051 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g536 - - vvi:100241625 1354.35