Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g540 ATGGCACGGTTCTGGGCTAAGTACATGGATGACAAGCTCTTGCCGGCAGCAATAAAGGTTGCGATGAGTAAGGGAGAGGAGCAAAAGGGAGTGATTGAAGAAATCCAGAAGCAGCTTAAAACTCTAGAGAGTGAGCTGAAAGAGAAGAAATTCTTTGGAGGGGAGAGTTTAGGATTCGTGGACATAGCTGCAAACACTATAGTTTGGCTTGTTGTTGCCCAAGAAGCTCTGGGAATGGAGATCCTGACCGAAGAGAAGTTTCCTGTTTTGCATGGATGGTATCAAAGGCTTGTTGACGATGCTGTTTTCAAGGAATGTATGCCGCCAAGGGAGCAACATCTTAGCTTTGTCAAAGGCATATCAATGGCAGCCATATCTCTTCAAACAGCAACTATGGCTGAAGAAGTAAAGCTTTTTGGCACATGGGCAAGCCCCTTTAGCCGCAGAATTGAAGTGGCCCTCAAGCTGAAAGGAGTTCAATTTGAGTACATAGAAGAGAACTTGTCCAATAAGAGTCCTGCGCTTCTCAAGTATAATCCAGTTCACAAGAAAATCCCTGTGCTTGTACACAATGGAAAGCCGGTTGCAGAGTCACTTGTCATCCTGGAGTACATTGATGAGACCTGGAAACATAATCCCATCTTGCCTACAGACCCTTATGAGAAGGCCATGGCACGGTTCTGGGCTAAGTACATGGATGACAAGCTCTGGCCGGCAGCAACAAAGGTCGTGGTGAGTAAGGGAGAGGAGCAAAAGGCAGTGATTGAAGAAATCCAGGAGCAGCTGAAAACTCTAGAGAGTGAACTGAAAGAGAAGAAATTCTTTGGAGGGGAGAGTTTGGGATTTGTAGACATAGCTGCAAACATTATAGTTTTTCTTCTTGTTGCCCAAGAAGCTCTGGGATTAATGGAGATCCTGACCGAAGAGAAGTTTCCTGTTTTGCATGAATGGTATCAAAGGCTTGTCGATGATGCTGTTTTCAAGGAATGTGTGCCACCAAGGGAGCGACATCTTGGCTTCTTCAAAGCTCGGATGAATAAAAAAAATTTAAGAGTGAAGTGA 1062 44.82 MARFWAKYMDDKLLPAAIKVAMSKGEEQKGVIEEIQKQLKTLESELKEKKFFGGESLGFVDIAANTIVWLVVAQEALGMEILTEEKFPVLHGWYQRLVDDAVFKECMPPREQHLSFVKGISMAAISLQTATMAEEVKLFGTWASPFSRRIEVALKLKGVQFEYIEENLSNKSPALLKYNPVHKKIPVLVHNGKPVAESLVILEYIDETWKHNPILPTDPYEKAMARFWAKYMDDKLWPAATKVVVSKGEEQKAVIEEIQEQLKTLESELKEKKFFGGESLGFVDIAANIIVFLLVAQEALGLMEILTEEKFPVLHEWYQRLVDDAVFKECVPPRERHLGFFKARMNKKNLRVK* 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6476896 6486416 + Vvi6g540 Vvi6g540 788117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g540 353 Pfam Glutathione S-transferase, C-terminal domain 231 321 IPR004046 -
Vvi6g540 353 Pfam Glutathione S-transferase, C-terminal domain 14 97 IPR004046 -
Vvi6g540 353 Gene3D - 215 351 - -
Vvi6g540 353 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 134 213 IPR004045 -
Vvi6g540 353 CDD GST_N_Tau 136 209 - -
Vvi6g540 353 PANTHER GLUTATHIONE S-TRANSFERASE U8 132 345 - -
Vvi6g540 353 PANTHER GLUTATHIONE S-TRANSFERASE U8 1 120 - -
Vvi6g540 353 SUPERFAMILY GST C-terminal domain-like 207 347 IPR036282 -
Vvi6g540 353 CDD GST_C_Tau 1 120 IPR045074 GO:0004364|GO:0006749
Vvi6g540 353 Gene3D Glutaredoxin 129 214 - -
Vvi6g540 353 SFLD Main.3: Omega- and Tau-like 132 349 IPR045073 -
Vvi6g540 353 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 218 349 IPR010987 -
Vvi6g540 353 Pfam Glutathione S-transferase, N-terminal domain 135 207 IPR004045 -
Vvi6g540 353 SUPERFAMILY Thioredoxin-like 136 237 IPR036249 -
Vvi6g540 353 SFLD Main (cytGST) 132 349 - -
Vvi6g540 353 SUPERFAMILY GST C-terminal domain-like 1 118 IPR036282 -
Vvi6g540 353 CDD GST_C_Tau 219 344 IPR045074 GO:0004364|GO:0006749
Vvi6g540 353 Gene3D - 1 126 - -
Vvi6g540 353 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 132 345 IPR045073 -
Vvi6g540 353 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 120 IPR045073 -
Vvi6g540 353 Coils Coil 248 275 - -
Vvi6g540 353 Coils Coil 25 52 - -
Vvi6g540 353 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 116 IPR010987 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g540 Vvi8g817 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g540 K00799 - vvi:109122826 429.869