Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g541 ATGGCACGGTTCTGGGCTAAGTACATAGATGACAAGGTAAACCCAATACCAAAAAAGGTTGTGGTGAGTAAGGGAGAGGAGCAAAAGGGAGTGATTGAAGAAATCCAGGAGCAGCTGAAAACTCTAGAGAGTGAGCTGAAAGAGACGAAATTCTTTGGAGGGGAGAGTTTGGGATTTGTAGACATAGCTGCAAACATTTTAGTTTGGCTTCTTGTTGCCCAAGAAGCTCTGGGATTTGGAACCATACCTCTCCAAACTGCAACAATGGCTGAAGAAGTGAAGCTGTTTGGTGCATGGGGAAGCCCCTATAGCCGCAGAATTGAATTGGCCCTGAAGCTGAAAGGACTTCAATTTGAATACATAGAAGAGAACTTGTACAATAAGAGTCCTGCGCTTCTCAAGTATAATCCAGTTCACAAGAAAGTCCCTGTGCTCGTACACAATGGAAAGCCGGTTGCAGAGTCACTTGTCATCCTGGAGTACATTGATGAGACCTGGAAACACAACCCCTTCTTGCCTACAGACCCTTACGAAAAGGCCAAGGCACGGTTCTGGGCTAGGTTCATAGATGAGAAGTTCTGGCCGGCAGCAAAAAAGGCTATGGCGAGTAGGGGAAGGGAGCGAGAGGAAGCGATTGAAGAAGCTCAGCAGCATCTGAAAACCCTTGAGAGTGAGCTGAAAGAGAAGAAAATCTTTGGAAGGGAGAGTTTGGGATTTGTAGACATAGCTGCGCATCTTTTGTTTTGGCTTGTTGTTGCCCAAGAAGCCTTTGGAGTGGAGATCCTAACTGAGGAGAAGTTTCCCGCCGTGCATGAATTGTATCAAAGGCTCGCAGATGAGGCTGTTTTCAAGGAATGTATGCCACCAAAGGAGCAACTCATTGCCTATCTTAAAGTTCGGTTGGGAGCCTGGACTGCTTCCAAATGA 927 46.49 MARFWAKYIDDKVNPIPKKVVVSKGEEQKGVIEEIQEQLKTLESELKETKFFGGESLGFVDIAANILVWLLVAQEALGFGTIPLQTATMAEEVKLFGAWGSPYSRRIELALKLKGLQFEYIEENLYNKSPALLKYNPVHKKVPVLVHNGKPVAESLVILEYIDETWKHNPFLPTDPYEKAKARFWARFIDEKFWPAAKKAMASRGREREEAIEEAQQHLKTLESELKEKKIFGRESLGFVDIAAHLLFWLVVAQEAFGVEILTEEKFPAVHELYQRLADEAVFKECMPPKEQLIAYLKVRLGAWTASK* 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6491354 6493969 + Vvi6g541 Vvi6g541 788118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g541 308 CDD GST_C_Tau 176 300 IPR045074 GO:0004364|GO:0006749
Vvi6g541 308 CDD GST_C_Tau 1 99 IPR045074 GO:0004364|GO:0006749
Vvi6g541 308 Gene3D - 172 306 - -
Vvi6g541 308 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 175 297 IPR010987 -
Vvi6g541 308 SUPERFAMILY GST C-terminal domain-like 1 79 IPR036282 -
Vvi6g541 308 Coils Coil 205 232 - -
Vvi6g541 308 Pfam Glutathione S-transferase, N-terminal domain 92 164 IPR004045 -
Vvi6g541 308 CDD GST_N_Tau 93 166 - -
Vvi6g541 308 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 81 IPR045073 -
Vvi6g541 308 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 89 300 IPR045073 -
Vvi6g541 308 Gene3D Glutaredoxin 88 171 - -
Vvi6g541 308 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 91 170 IPR004045 -
Vvi6g541 308 SUPERFAMILY GST C-terminal domain-like 164 301 IPR036282 -
Vvi6g541 308 Pfam Glutathione S-transferase, C-terminal domain 25 69 IPR004046 -
Vvi6g541 308 Pfam Glutathione S-transferase, C-terminal domain 193 278 IPR004046 -
Vvi6g541 308 Gene3D - 1 87 - -
Vvi6g541 308 SUPERFAMILY Thioredoxin-like 93 194 IPR036249 -
Vvi6g541 308 SFLD Glutathione Transferase (cytosolic) 89 305 IPR040079 -
Vvi6g541 308 SFLD Main.3: Omega- and Tau-like 89 305 IPR045073 -
Vvi6g541 308 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 131 IPR010987 -
Vvi6g541 308 PANTHER GLUTATHIONE S-TRANSFERASE U8 1 81 - -
Vvi6g541 308 PANTHER GLUTATHIONE S-TRANSFERASE U8 89 300 - -
Vvi6g541 308 Coils Coil 25 52 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g541 Vvi8g818 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g541 K00799 - vvi:100244980 431.795