Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g547 ATGGACAAAACAATGATGACCCACATGACATTTTTCTGGGGAATGAGCACAGAGATCTTCTTCTCAGGCTGGCCAGGGCAAAGCTCTGGGATGTATGCGGTGGCCTTGGCTCTGGTGTTTGGGCTTTCAATGCTTGTGGAGTGGCTCTCACACACCAGATTCATCAAGTCCACCACCAATAAGCTTGTGGCTGGCCTTCTCCAAACAGCTATGTATGGGCTAAGGGTTGGTCTGGCCTATCTGGTGATGCTTGCTGTCATGTCCTTCAACGTTGGGGTGTTCCTCGTGGCCATTGCTGGATATACCACTGGGTTCTTGCTTTTTGGGAGTAGGGTTTTCAGGGATTCATCAGAGATGTTGCCTTATGAGAAAGCCTCTGATCTTCCTCCTTTGAATTGCTGA 402 49.25 MDKTMMTHMTFFWGMSTEIFFSGWPGQSSGMYAVALALVFGLSMLVEWLSHTRFIKSTTNKLVAGLLQTAMYGLRVGLAYLVMLAVMSFNVGVFLVAIAGYTTGFLLFGSRVFRDSSEMLPYEKASDLPPLNC* 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6519184 6521679 - Vvi6g547 Vvi6g547 788124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g547 133 Pfam Ctr copper transporter family 60 108 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vvi6g547 133 Pfam Ctr copper transporter family 9 54 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vvi6g547 133 PANTHER - 1 130 - -
Vvi6g547 133 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 130 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g547 K14686 - vvi:100263794 268.855