Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g590 ATGGAAACTCCGTCGATCGTATTCTTTGTTGTGGCTGCAGCGTCGGCATATGTCCTCTGGTTCTATCTCCTGGCTCGGAAGCTGACCGGCCCAAAGATGTGGCCGGTGGTGGGTAGCCTTCCGGCGCTGTTCATGAACCGGAGGAGAATCCACGACTGGATCTCTGGAAACCTGAGAGAAACTGGTGGGGCTGCCACGTACCAAACATGCACCCTTGCTCTTCCTTTCTTGGCTTACAAACAGGGGTTTTATACCGTCACTTGTCACCCCAAGAACATCGAGCATATTCTCAGGACTCGGTTTGATAACTACCCCAAAGGACCAACATGGCAAACGGCTTTTCATGATCTGCTAGGGCAAGGGATTTTCAACAGTGATGGAGACACGTGGCTGATTCAACGAAAAACTGCTGCTCTGGAGTTCACCACCCGGACGCTTCGCCAAGCCATGTCTAGATGGGTGAACCGGACCATTAAGATGCGCTTATGGCGCATTTTAGAGAAGGCCGCCTCCGAGAAGTCGTCGGTGGACATGCAGGACTTGCTCCTCCGTTTGACGTTCGATAATATATGCGGACTCACCTTCGGAAAAGATCCAGAAACGCTCTCCCCCGATTTTCCAGAAAATCCGTTCTCCATGGCATTTGACTCCGCCACTGAGTCCACTCTGCAACGCTTGCTTTACCCCGGATTTCTATGGAGACTGAAGAAGTTTCTGAGAATTGGAGCGGAGAGGAGGCTCAAACAGAGCCTTAGAGTCGTTGAAAACTACATGGACGACGCCGTCGCCGCCCGCAAAGAAAGGCCATCAGATGACCTCCTATCTCGCTTCATGAAGAAGAGAGATGTCGATGGCAACGTCTTCCCAACTTCCGTCCTCCAACGCATAGCTCTCAACTTCGTCCTCGCCGGCCGCGACACCTCATCAGTCGCGCTGAGCTGGTTCTTCTGGCTCATCATGAACAACCCACGAGTCGAAGAAAAGATCACCACCGAATTATCGACAGTTCTCAGAGAAACACGCGGCGACGACCAAACCAAGTGGCTCGAAGAGCCTCTGGTCTTCGACGAAGCTGATCGGTTGATCTACCTGAAAGCGGCATTAGCCGAAACGCTGCGTTTATACCCATCCGTACCGGAGGACTTCAAGTACGTAGTATCGGACGATATTTTACCTGACGGAACCTACGTGCCGGCAGGTACGACTGTGACGTACTCTATATATTCTGTTGGGAGGATGAAAACGATATGGGGTGAGGACTGCTTGGAGTTTAAGCCGGAGCGGTGGCTCTCAACCGGCGGCGACCGTTTCGAACCGCCCAAGGATGGTTACAAGTTTGTGGCGTTCAACGCTGGACCGAGAACCTGTTTGGGGAAGGACTTGGCTTACCTGCAAATGAAGTCGGTGGCATCCGCCGTACTGTTACGCTACCGGCTGAGTCCTGTTCCCGGCCACCGGGTGGAGCAGAAGATGTCTTTGACTCTCTTCATGAAGAATGGACTGCGCGTGTACTTGCATCCACGTGGGCTTGAACCTCCTGGGGCCGCCACGTCAGCGTAG 1560 53.21 METPSIVFFVVAAASAYVLWFYLLARKLTGPKMWPVVGSLPALFMNRRRIHDWISGNLRETGGAATYQTCTLALPFLAYKQGFYTVTCHPKNIEHILRTRFDNYPKGPTWQTAFHDLLGQGIFNSDGDTWLIQRKTAALEFTTRTLRQAMSRWVNRTIKMRLWRILEKAASEKSSVDMQDLLLRLTFDNICGLTFGKDPETLSPDFPENPFSMAFDSATESTLQRLLYPGFLWRLKKFLRIGAERRLKQSLRVVENYMDDAVAARKERPSDDLLSRFMKKRDVDGNVFPTSVLQRIALNFVLAGRDTSSVALSWFFWLIMNNPRVEEKITTELSTVLRETRGDDQTKWLEEPLVFDEADRLIYLKAALAETLRLYPSVPEDFKYVVSDDILPDGTYVPAGTTVTYSIYSVGRMKTIWGEDCLEFKPERWLSTGGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVEQKMSLTLFMKNGLRVYLHPRGLEPPGAATSA* 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7005671 7007231 + Vvi6g590 Vvi6g590 788167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g590 519 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 SUPERFAMILY Cytochrome P450 20 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 Pfam Cytochrome P450 85 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g590 519 PANTHER CYTOCHROME P450 5 510 - -
Vvi6g590 519 PANTHER CYTOCHROME P450 FAMILY-DEPENDENT FATTY ACID HYDROXYLASE 5 510 - -
Vvi6g590 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g590 K15401 - vvi:100243236 1044.65