Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g599 ATGCCGTCCATAGGAGCAGTCAGATCGGAGAGTTCCGGCGAGGTTAGGTCCGGTAGTGGTTCGACGCCTCAGAAGCGGCGATCGATATCCGGTGGCCCGATTTCTCCACCATCGCCGGTGAAATGGAAATCCCCTCGCCGATCCGTCAATGGTAGCCCAAAAACTCCTTCAAAAGAGATCGAGAAAGATTCTGATGCTAAAGCCACAAGGTTGCATAAATCACCGATGAAAAATTTGTCAGAAATTTTTCTGGATAAATCCAAATGGAATCCAGGAGATTCTAAGCAGATGAGTGCAGCGAAGGAGGCCTTGCACGTGTCAACAGTGCCTTCCACTGTTGTGTGCCGTGAAGATGAGCAGAACAGGATTATGGATTTTTGTAAGGCATGTATAGAGCATGAGAAAGCTGGGAGTTTATATGCATGCGGATGTCCAGGGACCGGAAAATCCCTGTCCATGGAAAAAGTGAGGCGAGCTCTCGTTGATTGGGCAGGACAGGCAGGTTTTCAGCCACCTGATTTGTTATCCATCAATTGTACTTCTCTAACAAATACTCAAGAGATTTTCAGCAAGATACTTGAAAAACACCAACCAAGAAAGAAAACCAAGAGCTCTACCTCGCCTTTGCAGCATCTTCGGAACATTTATTCAAAAAAGCAGCAGTCATCTGGGATGAAGATGATGCTGATAATTGCTGATGAATTGGATTATTTGATTACAAGAGACCGGACTGTGCTTCATGATCTATTCATGCTTACAACTTTACCATTCTCCAGTTGCATATTAATAGGAGTATCAAATGCTATAGATCTAGCGGATCGTTTTCTTCCAAAACTTCAGTCGTTGAATTGCAAGCCTATGGTTGTAACTTTCCGGGCTTACTCTAAGGATCAGATCCTCAAGATTCTTCAACAGAGGTTAATGGCACTTCCTTTCCCTGTCTTTCAACCACAGGCATTGGAACTTTGTGCAAGAAAAGTTGCAGCTGCATCTGGAGATATGAGGAAAGCACTTAGTGTATGCAGGAGTGTCCTTGAGATTGTAGAAGCAGAGCTGAGAGAATCCGTAAATAGCCTAAGTGTATCATCAGAGAAGGGAGCCTTTGATCAGCAAACACTTCCAGCTCTTGACTCCTTAACAAATCAGGAAATCAATATTGTGAGGGTTGACCACATGGCTACTGCTTTGTCCAAGACTTTTCGATCACCAATAGTAGACACTATACAATCTCTGCCACAGCACCAACAGATTATACTATGCTCTGCTGTGAAGCTTTTCCGTGGGGGAAAGAAGGATACAACTGTAGGGGAGCTGAATAAATCTTATGTGGACATATGCAAATCAGTTCTAGTCCCACCAATTGGAATTCTAGAACTTTCAAGTATGTGCAGGGTGTTAAGCGACCAGGGCCTTCTTAAACTAGGTCAAGCTCGAGAAGACAAATTGAAAAGAGTAACATTGAAAGTAGATGAAGCAGATATTGCTTTTGCATTGCAGGGCATTCGATTTTTCCGGAACTGTCTTCAGTAG 1530 43.66 MPSIGAVRSESSGEVRSGSGSTPQKRRSISGGPISPPSPVKWKSPRRSVNGSPKTPSKEIEKDSDAKATRLHKSPMKNLSEIFLDKSKWNPGDSKQMSAAKEALHVSTVPSTVVCREDEQNRIMDFCKACIEHEKAGSLYACGCPGTGKSLSMEKVRRALVDWAGQAGFQPPDLLSINCTSLTNTQEIFSKILEKHQPRKKTKSSTSPLQHLRNIYSKKQQSSGMKMMLIIADELDYLITRDRTVLHDLFMLTTLPFSSCILIGVSNAIDLADRFLPKLQSLNCKPMVVTFRAYSKDQILKILQQRLMALPFPVFQPQALELCARKVAAASGDMRKALSVCRSVLEIVEAELRESVNSLSVSSEKGAFDQQTLPALDSLTNQEINIVRVDHMATALSKTFRSPIVDTIQSLPQHQQIILCSAVKLFRGGKKDTTVGELNKSYVDICKSVLVPPIGILELSSMCRVLSDQGLLKLGQAREDKLKRVTLKVDEADIAFALQGIRFFRNCLQ* 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7085858 7092222 + Vvi6g599 Vvi6g599 788176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g599 509 Gene3D - 92 284 IPR027417 -
Vvi6g599 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 356 IPR027417 -
Vvi6g599 509 CDD Cdc6_C 412 494 IPR015163 -
Vvi6g599 509 MobiDBLite consensus disorder prediction 1 74 - -
Vvi6g599 509 Pfam CDC6, C terminal winged helix domain 419 497 IPR015163 -
Vvi6g599 509 PANTHER CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 9 508 - -
Vvi6g599 509 Pfam AAA lid domain 317 350 IPR041083 -
Vvi6g599 509 SMART Cdc6_C_2 419 498 IPR015163 -
Vvi6g599 509 CDD AAA 119 281 - -
Vvi6g599 509 Gene3D - 285 366 - -
Vvi6g599 509 SUPERFAMILY Winged helix DNA-binding domain 404 507 IPR036390 -
Vvi6g599 509 PIRSF Cdc6 7 509 IPR016314 GO:0006270|GO:0051301
Vvi6g599 509 MobiDBLite consensus disorder prediction 10 31 - -
Vvi6g599 509 Gene3D - 405 498 IPR036388 -
Vvi6g599 509 MobiDBLite consensus disorder prediction 56 74 - -
Vvi6g599 509 Pfam AAA domain 134 253 IPR003593 -
Vvi6g599 509 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 9 508 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g599 K02213 - vvi:100245101 984.171