Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g613 ATGACCATGAAGATTTCAGAAAACATGTTGCTCCTTTTCTCTCAATCATCTGCAAATCAATGGCTTCTCGCCCTCGGCATACTATCTTTTCCTATCCTCTACCTGTTTCTTCTTCAAAGATGGAAGAAGAAAGGCATTGAAGGAGCTGCTAGGCTTCCTCCAAGCCCTCCAAAGCTTCCCATCATAGGCAACTTGCACCAATTAGGCAAATTGCCTCACCGCTCCCTCTCGAAACTTTCCCAAGAATTTGGCCCTGTCCTGTTACTGCAACTTGGGAGGATTCCCACCCTACTGATCTCATCGGCGGACATGGCCAAAGAAGTGTTGAAGACCCACGACATCGACTGCTGCAGTAGGGCACCCTCCCAAGGCCCCAAGAGACTTTCTTACAATTTCTTGGACATGTGCTTCTCACCGTACTCTGATTACTGGAGGGCGATGCGGAAAGTGTTCGTTCTTGAGCTTCTAAGCGCGAAAAGGGCACACTCATTGTGGCATGCGTGGGAAGTAGAGGTTAGTCATTTGATCAGTTCTCTCTCCGAGGCTTCACCAAATCCAGTTGATCTCCATGAGAAGATATTTTCTCTTATGGACGGCATCCTCAATATGTTTGCTTTTGGTAAGAATTATGGAGGAAAGCAGTTCAAGAATGAGAAGTTTCAAGATGTTCTTGTTGAGGCCATGAAAATGCTGGATAGTTTTTCTGCCGAGGACTTCTTTCCGTCTTTTGGGTGGATTATAGATGCTTTGACAGGACTTCGTGCTAGGCACAATAAGTGTTTCCGTAACCTTGATAATTACTTCCAAATGGTTGTTGATGAACATCTTGATCCCACCAGGCCAAAACCAGAACATGAAGACCTTGTTGATGTTTTGTTAGGATTGTCAAAAGATGAAAATTTTGCATTTCATCTCACCAATGACCATATCAAGGCCATTCTCCTGAATACATTTATTGGTGGAACAGACACTGGTGCAGTGACAATGGTCTGGGCGATGTCTGAGCTCATGGCAAACCCCAGAGTGATGAAGAAGGTACAAGCTGAGGTCAGGAGCTGTGTTGGAAGTAAGCCAAAAGTGGACAGAGACGATCTTGCTAAGTTGAAATACTTGAAGATGGTGGTCAAGGAAACTTTTAGAATGCATCCAGCAGCACCGCTATTGATTCCACACCGGACGAGGCAGCACTGTCAGATCAATGCCAATGGCTGCACATACGACATCTTCCCACAAACAACAATCCTAGTTAATGCATTTGCAATTGGAAGAGACCCCAATAGCTGGAAGAACCCAGATGAGTTTTACCCAGAGAGGTTTGAGGACAGTGACATCGATTTCAAAGGGCAACATTTTGAGCTATTGCCTTTTGGGGCTGGCAGAAGGATCTGTCCTGCTATAGCCATGGCAGTGTCCACTGTGGAGTTCACACTGGCCAACCTCTTGTACTGCTTTGACTGGGAGATGCCAATGGGGATGAAGACACAAGATATGGACATGGAAGAGATGGGTGGCATTACCACCCATAGGAAGACACCCCTTTGTCTCGTACCAATCAAATATGGTTGCGTGGAGTAA 1575 45.78 MTMKISENMLLLFSQSSANQWLLALGILSFPILYLFLLQRWKKKGIEGAARLPPSPPKLPIIGNLHQLGKLPHRSLSKLSQEFGPVLLLQLGRIPTLLISSADMAKEVLKTHDIDCCSRAPSQGPKRLSYNFLDMCFSPYSDYWRAMRKVFVLELLSAKRAHSLWHAWEVEVSHLISSLSEASPNPVDLHEKIFSLMDGILNMFAFGKNYGGKQFKNEKFQDVLVEAMKMLDSFSAEDFFPSFGWIIDALTGLRARHNKCFRNLDNYFQMVVDEHLDPTRPKPEHEDLVDVLLGLSKDENFAFHLTNDHIKAILLNTFIGGTDTGAVTMVWAMSELMANPRVMKKVQAEVRSCVGSKPKVDRDDLAKLKYLKMVVKETFRMHPAAPLLIPHRTRQHCQINANGCTYDIFPQTTILVNAFAIGRDPNSWKNPDEFYPERFEDSDIDFKGQHFELLPFGAGRRICPAIAMAVSTVEFTLANLLYCFDWEMPMGMKTQDMDMEEMGGITTHRKTPLCLVPIKYGCVE* 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7205212 7207069 + Vvi6g613 Vvi6g613 788190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g613 524 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 Gene3D Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 SUPERFAMILY Cytochrome P450 53 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 Pfam Cytochrome P450 53 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vvi6g613 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi6g613 524 PANTHER CYTOCHROME P450 71B10 16 520 - -
Vvi6g613 524 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 16 520 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g613 - K13029 vvi:100262131 1075.85