Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g623 ATGGATTCACAAGAGGTATGGAACTTGGAGAATGGTGAGGTAAAGGGGTTGAGCAACAAGGATGGACCACATTTAATAAGAAACGCCCACACCATGTCCTCTTCATCCTTACGTAAGAGGTCGGATCCGATGCTTCTCCCCAAGGTTAGATGCCGAGTCCTCAGACAATTCCTCAACAATCTTCAAGAGGTCATCCTTGGGACCAAGCTTTGTCTGCTCTTCCCAGCCATTCCTTTAGCAGTCTTAGCGAAGTGTTACCAATTTGGAAGACCTTGGATTTTTGCTCTGAGTTTAATGGGGCTGACACCGCTAGCTGAACGTGTCAGCTTTCTAACTGAACAGATAGCATACTTCACTGGTCCAACAGTTGGAGGGCTTCTCAATGCAACATGTGGTAATGCAACAGAACTGATAATAGCCCTATTTGCCCTTCACCAAAAGAAAATCCTTGTGTTGAAATACTCTCTTCTGGGTTCCATTCTCTCCAACCTCCTCCTTGTTCTTGGGACCTCTCTCTTGTTTGGAGGCTTGGCTAACCTAAAAAAGGAGCAACTTTATGATAGAAAACAAGCTGATGTGAACTCGCTGCTTCTACTGCTGGGATTGCTATGCCATGTGCTTCCTTTGATGTTCAAATACGCTGCATGGACAGACACATTCACAGCCATTTCCACTCTTCAGTTCTCAAGAGCCAGCAGCATTTTGATGCTTACAACATATGTTGCATACCTCATCTTCCAGCTCAAAACCCACCGCCAACTTTTCGAATCACAAGAGGAAGATGAAGATGGTGATGATGAAAAGGCTCTGATTGGATTCTGGAGTGCATTTAGCTGGTTGGTTGGCATGACAGTTATCATAGCACTGTTATCTGAGTATGTTGTGGGCACAATTGAGGCTGCCTCGGATTCCTGGGGCGTTTCTGTTAGCTTTATCAGCATTATTTTGCTGCCAATAGTGGGAAACGCTGCAGAACATGCTGGGTCAATCATATTTGCTTTCAAAAACAAGTTGGACATATCTTTGGGGGTTGCTTTGGGGTCTGCAACACAGATTTCCATGTTTGTGGTTCCACTCTGTGTGATCGTGGCTTGGATCATGGGGGTTGCTATGGATCTTGATTTCAGTCTCCTTGAAACCGGCTCTCTCGCCTTCGCCATCATTATCACAGCCTTCGCTTTGCAGGATGGAACTTCACATTACATGAAAGGAGTGGTTCTTTCTCTTTGCTACATAGTAATAGCTGCATGCTTTTTTGTTCATAAAAATCCAAGTGTCCATCAATCAACTACTGACAGCTTGAGAGTGGTCCAATCATCGACCGGAGTCCTGACTGCTTAA 1341 44.89 MDSQEVWNLENGEVKGLSNKDGPHLIRNAHTMSSSSLRKRSDPMLLPKVRCRVLRQFLNNLQEVILGTKLCLLFPAIPLAVLAKCYQFGRPWIFALSLMGLTPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATELIIALFALHQKKILVLKYSLLGSILSNLLLVLGTSLLFGGLANLKKEQLYDRKQADVNSLLLLLGLLCHVLPLMFKYAAWTDTFTAISTLQFSRASSILMLTTYVAYLIFQLKTHRQLFESQEEDEDGDDEKALIGFWSAFSWLVGMTVIIALLSEYVVGTIEAASDSWGVSVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVALGSATQISMFVVPLCVIVAWIMGVAMDLDFSLLETGSLAFAIIITAFALQDGTSHYMKGVVLSLCYIVIAACFFVHKNPSVHQSTTDSLRVVQSSTGVLTA* 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7301237 7304370 - Vvi6g623 Vvi6g623 788200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g623 446 Gene3D - 267 420 IPR044880 -
Vvi6g623 446 Gene3D - 121 259 IPR044880 -
Vvi6g623 446 Pfam Sodium/calcium exchanger protein 92 248 IPR004837 GO:0016021|GO:0055085
Vvi6g623 446 Pfam Sodium/calcium exchanger protein 277 417 IPR004837 GO:0016021|GO:0055085
Vvi6g623 446 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 5 432 IPR004713 GO:0006812|GO:0008324|GO:0016021
Vvi6g623 446 PANTHER VACUOLAR CATION/PROTON EXCHANGER 5 432 - -
Vvi6g623 446 TIGRFAM caca2: calcium/proton exchanger 56 419 - -
Vvi6g623 446 TIGRFAM cax: calcium/proton exchanger 75 419 IPR004798 GO:0006816|GO:0015369
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g623 Vvi8g893 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g623 K07300 - vvi:100243275 823.542