Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g649 ATGGAGGATCGCTACTCGGCTGTGGTTGACCTTCAAGGAGACCACAAACAGGCTTTCTTTGGTATTTTTGATGGGCATGGTGGTGCAAAAGCTGCTGAATTTGCAGCACAAAATTTGAAAAACAACATCTTAGATGAAGTGGTGAGAAGAGGTGACGATGAAATTGAAGAGTCAGTAAAACACGGTTACTTGAACACGGATTCTGATTTTCTAAAGGAGGATCTCCGCGGTGGATCATGCTGTGTGACAGCTTTGATCCGGAATGGCAAACTTGCTGTGTCAAATGCTGGTGACTGTCGCGCTGTTATGAGCAGAGGGGGAATTGCCAAGGCCCTCACTTCTGATCATCGGCCTTCGAGAGAGGATGAAAAGAGCAGAATTGAAAAGCTGGATGGCTATGTTGATTGCTACCATGGTGTTTGGAGAATTCAGGGATCTTTGGCTGTATCCCGAGGAATTGGCGATCGTCATCTTAAGCAGTGGGTAACTGCAGAGCCAGAGACAAAAATCCTTGCAATTCAACCTGACTATGAGTTCTTAATCCTTGCTTCTGATGGATTGTGGGATAAGGTTACTAACCAAGAAGCAGTGGACATTTCTCGTCCTTTTTGCATCGGTGTTGATAAGCCAGATCCTTTGTTTGCCTGTAAAAAGCTCGTAGACCTCTCTGTTTCACGAGGCTCAACTGATGATATCAGTGTGATGCTAATTCGGTTGGGCCAGTATATCTGA 732 45.22 MEDRYSAVVDLQGDHKQAFFGIFDGHGGAKAAEFAAQNLKNNILDEVVRRGDDEIEESVKHGYLNTDSDFLKEDLRGGSCCVTALIRNGKLAVSNAGDCRAVMSRGGIAKALTSDHRPSREDEKSRIEKLDGYVDCYHGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKILAIQPDYEFLILASDGLWDKVTNQEAVDISRPFCIGVDKPDPLFACKKLVDLSVSRGSTDDISVMLIRLGQYI* 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7567080 7569864 + Vvi6g649 Vvi6g649 788226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g649 243 CDD PP2Cc 1 239 IPR001932 -
Vvi6g649 243 Gene3D - 1 242 IPR036457 -
Vvi6g649 243 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN-RELATED 1 242 - -
Vvi6g649 243 SUPERFAMILY PP2C-like 1 240 IPR036457 -
Vvi6g649 243 ProSitePatterns PPM-type phosphatase domain signature. 19 27 IPR000222 GO:0043169
Vvi6g649 243 PANTHER PROTEIN PHOSPHATASE 2C 1 242 IPR015655 GO:0004722|GO:0006470
Vvi6g649 243 Pfam Protein phosphatase 2C 12 232 IPR001932 -
Vvi6g649 243 SMART PP2C_4 1 237 IPR001932 -
Vvi6g649 243 ProSiteProfiles PPM-type phosphatase domain profile. 1 239 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi6g649 Vvi13g68 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g649 K17506 - vvi:100246740 493.812