Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g654 ATGAGCCCAACACCATCAGAAGAATCTATCGAACAAGAAATTTCTCAGCAGAATGTGAAGAGGGTATCATGTACCACTGTTCTCACATTGGCTTATCAAAGTCTTGGGGTGGTTTATGGTGACCTCAGTACCTCCCCTCTCTATGTCTACAAGACGACCTTCTCTGGGAAGTCGAGCCTTCATGGGAATGATGAAGAGATTTATGGGGTGCTTTCCTTCATCTTCTGGACATTTACTCTTATAGCTCTCTTCAAATACATCTTCATTGTGATGTCAGCTGCTGATAATGGTGAAGGTGGTACCTTTGCATTGTACTCCTTACTTTGCCGGCATGCAAGATTGAGCATTCTGCCCAATCAACAAGCCATAGATCAAAAGTTGTCAGCCTATGCAATGGAAAGATCAGCAGACACACGGCAGAGCTTTGTTATGAAATCAGTCTTTGAGAAGCACCCAAAATTTCGCCAGGGGCTATTGATTTTTGTTTTGCTGGGAACCTGTATGGCAATTGGTGATGGAATTCTCACTCCTGCAATATCAGTTCTTTCAGCAGTTTCGGGTGTTCAACTGAAAATCACAGAGCTCCATGAGAATCATGTTGTTCTAATCTCGTGTGTCATATTAGTGGTGCTTTTCTCTCTTCAGCACTATGGAACACATAGAGTTGCCTTCATGTTTGCTCCAATTGTCACAGCATGGCTTCTGTGCATTAGTGGCATTGGGATATATAACATCTTGAGGTGGAATCCACATATATTTTGTGCCCTTTCTCCAACTTACATGTTGAAGTTCCTTAAAAGCACAGGCATTGAAGGATGGATATCATTAGGAGGAGTGGTTCTCTCAATCACAGGTGTAGAGATGATGTTTGCTGATTTGGGCCATTTCTCTGCGCTCTCAATTAAGATTGCATTCACGGTTCTAGTGTATCCCTCTTTGATTCTTGCATATATGGGCGAGGCTGCATATCTCTCCAGGCACCATGAAGATCTCCAAAGAAGCTTTTATAAAGCCATACCAGAAGCTGTGTTTTGGCCAGTGTTCATAGTTGCCACTTTTGCAGCTGTTGTAGCAAGTCAGGCTGCAATCTCAGCTACATTCTCCATTATAAGCCAGTGCTGTGCATTAAACTGTTTTCCTCGTGTGAAAATTGTTCATACGTCACAAAAAATATCTGGACAGATTTACATACCGGAGGTCAATTGGATGTTGATGTGCCTCTGTTTAGCTGTGACAATTGGATTAAGGGATACTAACATGATGGGTCATGCTTATGGGCTGGCAGTGACTACTGTTATGCTTGTGACAACTTGCTTGATGGCAATGGTGATGATAATCGTGTGGAAGCTACAGATATTTACGGCTGTTGCATTTTTGGTGTTTTTTGGATCAATGGAACTCCTTTACATCTCTGCATCATTTTGCAAGGTCCCAGAAGGGGGTTGGATCCCACTTGCTCTGTCCTTGATCTTCCTGACTGTAATGTATGTTTGGAACTATGGAACTTTGCAGAAACACCAGTTTGATGCGGAGAACAAGGTTTCGATGAATAGAATATTGCGTTTAGGGCCAAGCCTTGGCATGGTCCGGGTACCTGGAATTGGGCTCATCTACACTAATCTGGTGACAGGAGTTCCAGCTGTTTTTGGACATTTTGTGACGAACTTACCAGCTTTCCATCAGGTCCTTGTTTTTGTATGTGTGAAGTCTGTTCAAGTCCCCTATGTCTGTGAAAAGGAACGGTTTCTAATAAGTAGAGTGGGCCGAAAAGAGCATAGCATGTTCCGGTGCATTGTCAGGTATGGATACAAGAATCTTCAACAGGAAAACTACGATTTTGAGAATACACTGGTATCTGAACTCGTACAGTTTGTTGAAAAAGAAAAAGAAAGTGGTTTGGGACCAATAACTGAAGAATCATCTAGAGAAGTCTCTGCAGATACTGAAAATCCTACGGTATTAAAAAATTATCGATGTGCCAATTAA 1986 42.2 MSPTPSEESIEQEISQQNVKRVSCTTVLTLAYQSLGVVYGDLSTSPLYVYKTTFSGKSSLHGNDEEIYGVLSFIFWTFTLIALFKYIFIVMSAADNGEGGTFALYSLLCRHARLSILPNQQAIDQKLSAYAMERSADTRQSFVMKSVFEKHPKFRQGLLIFVLLGTCMAIGDGILTPAISVLSAVSGVQLKITELHENHVVLISCVILVVLFSLQHYGTHRVAFMFAPIVTAWLLCISGIGIYNILRWNPHIFCALSPTYMLKFLKSTGIEGWISLGGVVLSITGVEMMFADLGHFSALSIKIAFTVLVYPSLILAYMGEAAYLSRHHEDLQRSFYKAIPEAVFWPVFIVATFAAVVASQAAISATFSIISQCCALNCFPRVKIVHTSQKISGQIYIPEVNWMLMCLCLAVTIGLRDTNMMGHAYGLAVTTVMLVTTCLMAMVMIIVWKLQIFTAVAFLVFFGSMELLYISASFCKVPEGGWIPLALSLIFLTVMYVWNYGTLQKHQFDAENKVSMNRILRLGPSLGMVRVPGIGLIYTNLVTGVPAVFGHFVTNLPAFHQVLVFVCVKSVQVPYVCEKERFLISRVGRKEHSMFRCIVRYGYKNLQQENYDFENTLVSELVQFVEKEKESGLGPITEESSREVSADTENPTVLKNYRCAN* 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7615483 7620474 + Vvi6g654 Vvi6g654 788231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g654 661 TIGRFAM kup: potassium uptake protein 30 642 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi6g654 661 PANTHER POTASSIUM TRANSPORTER 9 630 - -
Vvi6g654 661 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 9 630 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi6g654 661 Pfam K+ potassium transporter 32 604 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g654 K03549 - vvi:100262109 1233.01