Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g678 ATGTCGAGTGAGAGTGGAAGTGTGACTCGGAGTGAGGTGGTGTGCGTCACCGGCGGCAGCGGCTATATCGGTTCCTGGCTGGTCTGTCTCCTTCTCCGCCGTGGCTACACCGTCCACGCCACCGTCAAAAATCTCAAGGATGAAAGGGAAACGAAGCATCTAGAAGCCCTAGAGGGGGCAGACTCCCGTCTCCGTCTCTTCCAGATTGATGTCCTCGACTACGACTCCATCGTCGCTGCCGTTAATGGCGCCGCCGGTGTCTTCCACCTCGCCTCCCCCTGCATCGTCGATCAGGTTCAGGATCCCGAGAAGGAACTTCTAGATCCGGCAATTAAAGGGACAAACAATGTCTTAACAGCAGCTAAGGAGCTGGGGGTTGGGCGTGTGGTGGTGACATCATCTATCTCGGCTATCATTCCTAGCCCAAACTGGCCAGCTGATGTTGTCAAAGGGGAGGATTGCTGGACTGATACCGAGTACTGCAAGCAGAAAGGAATATGGTATCCACTTTCAAAGACACTGGCTGAAAAAGCAGCTTGGGAATTTGCCAAGGAGAAAGGTTTGGATGTGGTTGTGGTGAATCCTGGCACTGTGATGGGCCCTATTCTTCCCCCAGGGCTCAATGCAAGCATGTTAATGATTCTTCGCCTTCTCCAAGGGTGCACTGACATATACGAGGACTTTTTTATGGGATCTGTTCATGTTAAAGACGTAGCCCTAGCACATATTTTGGTGTATGAGAACAAATCAGCATCTGGAAGGCACTTGTGTGTTGAAGCTATTTCTCATTATGGTGACTTTGCAGCCAAGGTTGCAGAACTTTACCCTGAATACAAAGTGCCCAGGTTGCCAAAGGATACTCAACCTGGTTTGCTAAGGGCCAAGACTGCATCTAAGAAGCTGATGGACTTGGGTCTACAATTCATTCCCATGGAGCAAATTATCAAAGATTCTGTTGAGAGTCTCCGGAGCAAAGGGTTTATTTCTTGA 990 49.9 MSSESGSVTRSEVVCVTGGSGYIGSWLVCLLLRRGYTVHATVKNLKDERETKHLEALEGADSRLRLFQIDVLDYDSIVAAVNGAAGVFHLASPCIVDQVQDPEKELLDPAIKGTNNVLTAAKELGVGRVVVTSSISAIIPSPNWPADVVKGEDCWTDTEYCKQKGIWYPLSKTLAEKAAWEFAKEKGLDVVVVNPGTVMGPILPPGLNASMLMILRLLQGCTDIYEDFFMGSVHVKDVALAHILVYENKSASGRHLCVEAISHYGDFAAKVAELYPEYKVPRLPKDTQPGLLRAKTASKKLMDLGLQFIPMEQIIKDSVESLRSKGFIS* 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 7898079 7902492 - Vvi6g678 Vvi6g678 788255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g678 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 323 IPR036291 -
Vvi6g678 329 Gene3D - 4 329 - -
Vvi6g678 329 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 12 320 - -
Vvi6g678 329 CDD FR_SDR_e 14 306 - -
Vvi6g678 329 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 320 - -
Vvi6g678 329 Pfam NAD dependent epimerase/dehydratase family 14 253 IPR001509 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g678 - - vvi:100253488 652.899