Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi6g709 ATGTTGGGAAGAATTGCGAAGAGATGCACTCTGACCTTTTCTTTTAACGTTGCTGTCTTTCTTCTTCCGCGTTTCTTTTCCTCTTTTTTCCTTTTTCTTTATTATGATTTATGGGTACTCACGAAAACCGCGTTTCTCGAGAAAACTTTTCTACCCTCCTATCTCAATTTCCACACCATTAAAAGTCTATGCATGGGTGATGGGGACCCTAGAAGCTGCGCTGCACTGGAACACACTCTGAAGTCTCTTGACCGTCAGATCTCCCAGTACGTGGCGGCAGATCAGCCCATCTGGGCGGATTCCGTCGATGCCGGAGCGTTCCTCGACGCCGTCGACGAATTAATCGCCACCCTCAGGGAGTGGCATCCGATGACTGGGGAAAAATCCGTGGCCGCGTGTTTGGATCGCGCCGAGGATTTGTTGCAGCAGGCGATGTTTCGCGTTGAGGATGAGTTCAGGTCGTTGATGGAACGGGGTGGCGAGTCGTTCGAGCTGAAGGATGAAGACGACGACGGAGGAATGATCGGATGCGGCGACGACCACCAGATCCCCATCGCGCACCCGATCTCCGATTATGATATCCTGATCGACGCTTTACCGTCGGTCACGATCAACGATCTGCACGAGATCGCGAAACGAATGGTTGCAGCAGGGTTCGGGAAGGAGTGTTCGCATGTTTACAGTAGTTGCAGAAGAGAGTTCTTGGAGGAAAGCATTTCTAGGTTAGGGTTACAGAAGCTGAGCATCGAAGAAATTCAGAAAATGGCGTGGTGTGATCTCGAGGACCAAATCGAGCGGTGGACCAAGGCCGCGACCGTGGCGCTTCGGATTCTTTTCCCCAGCGAACGGCGTCTCTGCGATCGAGTCTTCTTCGGCTTCTCCTCCGCAGCCAATCTCTCCTTCATGGAGGTATGCCGTGGTTCCACAATTCAGCTGTTAAATTTTGCTGACGCCGTGGCAATCGGCAGCCGATCGCCAGAACGGTTGTTCAAAGTCCTTGACGTGTTTGAAACTCTGAGAGACTTAATGCCTGAGTTTGAAGCCGTGTTCTCCGATCAGTACTGTTTGTTGCTTAGAAACGAAGCAATTACTATCTGGAGAAGGTTAGGAGAAGCGATCAGAGGAATATTAATGGAATTAGAGAATCTAATCCGGCGGGACCCTGCAAAATCGGAGGTTCCCGGCGGTGGCCTTCATCCCATCACCCGCTATGTGATGAACTACCTCCGAGCAGCTTGCCGCTCCCGACAAACTCTGGAGCAAGTCTTCAATGAAAGCATCGATGATCGAACATCATCTTCCTCATTATCAGTTCAAATGGCTTGGATAATGGAGCTGTTGGAGAGCAATCTGGAGGTGAAATCGAGGATTTACAGAGACCCTGCCTTGTGCTCTGTTTTCATGATGAATAATGGAAAATACATTGTTCAAAAGGTTAAAGACAGTGAACTGGGATTGCTCTTAGGCGACGATTGGATCCGGAAACACACTGCAAAAATCCGACAATATCAAGTGAACTATCAAAGAAGCTCATGGAATAAGGTTTTGGCAGTGTTGAAGGCAGACAATACCTCACTGGCTCCAAACCCCTCATTGAACACCATGAGAGAGAGGCTCAAGTTATTCAACTTGCATTTTGATGAGACCTGCAGGGCTCAATCTACCTGGTTCATTTTCGATGAACAGCTCAGAGAGGAGCTGAGGATTTCAGTGGTCGAGAACTTGTCTCAGGTCTACCGCAACTTCCTTGGAAGGCTCCAGAGTGTTCCAGAAGCCGGGAAGCATCCGGAGAAGCTTATCAAGTACTCTGTGGAAGAAATTGGAGCTCGGGTTAACGGCTTATTTCAGAGAGGTGGTGGTGGTGCCATTTCTGTTTGTGTGCAATCTTTACTTGAAATGAAGAAATTTGAAACTGGTTTCAAGGAATTTGGGCTTCTGAACCAAGTTTGA 1950 48.77 MLGRIAKRCTLTFSFNVAVFLLPRFFSSFFLFLYYDLWVLTKTAFLEKTFLPSYLNFHTIKSLCMGDGDPRSCAALEHTLKSLDRQISQYVAADQPIWADSVDAGAFLDAVDELIATLREWHPMTGEKSVAACLDRAEDLLQQAMFRVEDEFRSLMERGGESFELKDEDDDGGMIGCGDDHQIPIAHPISDYDILIDALPSVTINDLHEIAKRMVAAGFGKECSHVYSSCRREFLEESISRLGLQKLSIEEIQKMAWCDLEDQIERWTKAATVALRILFPSERRLCDRVFFGFSSAANLSFMEVCRGSTIQLLNFADAVAIGSRSPERLFKVLDVFETLRDLMPEFEAVFSDQYCLLLRNEAITIWRRLGEAIRGILMELENLIRRDPAKSEVPGGGLHPITRYVMNYLRAACRSRQTLEQVFNESIDDRTSSSSLSVQMAWIMELLESNLEVKSRIYRDPALCSVFMMNNGKYIVQKVKDSELGLLLGDDWIRKHTAKIRQYQVNYQRSSWNKVLAVLKADNTSLAPNPSLNTMRERLKLFNLHFDETCRAQSTWFIFDEQLREELRISVVENLSQVYRNFLGRLQSVPEAGKHPEKLIKYSVEEIGARVNGLFQRGGGGAISVCVQSLLEMKKFETGFKEFGLLNQV* 650
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8246591 8249000 + Vvi6g709 Vvi6g709 788286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi6g709 649 Gene3D Exocyst complex component Exo70 96 619 - -
Vvi6g709 649 SUPERFAMILY Cullin repeat-like 98 615 IPR016159 -
Vvi6g709 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 70 616 IPR004140 GO:0000145|GO:0006887
Vvi6g709 649 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 70 616 - -
Vvi6g709 649 Pfam Exo70 exocyst complex subunit 265 611 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi6g709 K07195 - vvi:100255378 1077.77